Parasteatoda tepidariorum (common house spider): 107440023
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Entry
107440023 CDS
T06106
Name
(RefSeq) ATP-dependent RNA helicase DDX19A
KO
K18655
ATP-dependent RNA helicase DDX19/DBP5 [EC:
5.6.2.7
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03013
Nucleocytoplasmic transport
ptep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107440023
03015 mRNA surveillance pathway
107440023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107440023
Enzymes [BR:
ptep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107440023
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
107440023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_30
Motif
Other DBs
NCBI-GeneID:
107440023
NCBI-ProteinID:
XP_015908282
LinkDB
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Position
7:complement(71720396..71726422)
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AA seq
481 aa
AA seq
DB search
MADVEDWGFSADVQEKNLSSLRNLNINGPTPPPASVPENNLEAKSEALENEEPELDPAEI
SLMKKLVRSHLINVTSDIDVQQRSPNSPLYSVKSFDELNLRPELLKGVYNMGFNSPSKIQ
ETALPTLIADPPQNMIAQSQSGTGKTAAFTLASLSRVDPSLKYPHVLVLSPTYELAMQTG
KVAQQMAKFCPNIEFRYAVRGEHLERGTKIEEHFLIGTPGKVFDWAVRFKFFDLKKIKVF
VLDEADVMIATQGYQDQSIRIHKQLPKDCQMMLFSATYSSEVIDFAELIVPDPIIIRLRR
EEESLDNIKQYYIVCDTKEEKYEALCNIYGTISIGQAFIFCHTKKTAGWLAEKMSKDGHN
VALLSGELSVEQRIAVLTRFQKGQEKVLITTNVCARGIDVEQVTVVINFDLPMNQAGEAD
CETYLHRIGRTGRFGKSGLAINMIDGKKSMAVLRQIEEHFQKKIKKVDANEIDELEEMGK
R
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttgaggactggggattttctgctgacgtccaagaaaaaaatttatcttct
cttcgtaacttaaacataaatggtcccactccacctcctgcttctgtaccggaaaacaat
ttagaagctaaaagtgaagctcttgaaaatgaagaacctgaattggatcctgcagaaata
tcacttatgaaaaaattagtcagatctcatttgataaatgtcacaagtgatattgatgtt
caacagagaagtcccaactcacctttatattctgtgaaatcatttgatgagctgaactta
cgtcctgaactgttaaaaggtgtgtacaacatgggttttaattctccctctaaaatacaa
gaaactgcccttcctactttaattgctgatccaccccaaaacatgattgcacagtctcag
agtggaactggcaaaacagctgccttcacattggctagtctaagtcgtgtagatccatct
ctcaaatacccgcatgtcctggtactttccccaacttatgagttagctatgcaaactgga
aaagttgcacagcagatggcaaagttctgtccaaatattgaatttcgatatgctgtcaga
ggtgaacacttggagaggggaacgaagatagaagaacactttctgattggaactcctggc
aaagtgtttgactgggctgttcgcttcaaattctttgacttaaagaaaattaaagtgttt
gttttggatgaagctgatgtaatgatagcaacacaaggttatcaggaccaatccattcgt
attcataaacaactaccaaaggattgtcaaatgatgttgttttctgctacctattcttcg
gaagttatagattttgctgaacttattgttccagatcctatcatcattcgattaagaagg
gaggaggaaagcttggacaatattaaacaatattacattgtttgtgatacaaaagaagaa
aagtatgaagctttatgcaatatttatggaactatttctattggccaggcttttatattt
tgccacactaaaaagacagctggctggttagctgagaaaatgtcaaaagatggtcacaat
gttgctcttttaagtggagaattaagtgtggaacagcgtatcgctgttttaactcgtttc
cagaaaggacaagaaaaagttttgataaccaccaatgtttgtgctcgtggtattgatgtg
gagcaagtaactgtggttataaattttgatttgccaatgaatcaagctggtgaagcagat
tgtgagacttaccttcatcgcataggtcggacgggacgatttggaaaatctggactggcc
atcaacatgattgatggaaagaaatctatggctgttctaagacaaattgaagaacatttt
caaaagaaaatcaagaaagtagatgcaaatgaaattgacgaattggaagaaatgggcaaa
agataa
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