Parasteatoda tepidariorum (common house spider): 107441627
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Entry
107441627 CDS
T06106
Name
(RefSeq) CCR4-NOT transcription complex subunit 2 isoform X1
KO
K12605
CCR4-NOT transcription complex subunit 2
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107441627
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107441627
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107441627
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
107441627
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NOT2_3_5_C
Motif
Other DBs
NCBI-GeneID:
107441627
NCBI-ProteinID:
XP_015910447
LinkDB
All DBs
Position
1:complement(94086858..94116456)
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AA seq
508 aa
AA seq
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MSSAGSHPFGYGQSANNALGMGTPTLQQTPRSLTGQQFPSRSTGNGSHVQGHVTPTSSGM
PNFSQCLPNSIPPQQPSPNRYSSQSFGAKEESRNILMGTRALPSQRTLTQDMKRIVGIGP
LGGNMPSSDDSFSKRDRSSMFNVGVNSLAAMANRTGFSQNSRGFPLQGLMNNSMQPNNFS
SSPGLMNNNMQSYNFSTSPALDLSEFPSLTNRSSQENSSANMSHNPMAGRPPYVGMVKQP
TNESNEFQIHSEDFPALPGSQTQESNQENVNKTTSGRCLETSKDSNHFSNDKSSVTQKRG
IQTSKDGRVTNIPPGMVTDQFGMVGLLTFIRAAESEPKLVSLALGSDLTTLGLNLNTTEN
LYPNFSGPWAEHPCRPQDIDYHVPAEYLVNQSIRDKLAPVKLNRYGEDLLFYLFYMFSGD
VLQIAAAAELYNRDWRFHKDERVWITRVPGMNPTEKCVSFERGMYYFFDADNWRKVAKEF
HLDYDRLEDRPNVPPAVSSLAPSQAVLT
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccagtgcaggttcgcatccatttgggtatggccaaagtgctaataatgctttaggt
atgggaacaccaactttacaacaaacgcctcgaagtttgaccggtcagcaattcccttct
cggtcaactggaaatggtagtcatgttcaaggtcatgtaacaccgacgagttcagggatg
ccaaatttttctcagtgtcttcccaatagtatccctccacaacaaccttcacccaatcgg
tactcatctcagtcttttggtgctaaagaagaaagcaggaatattctcatgggaactcga
gcacttccaagtcaaagaactttaacgcaagatatgaaaaggatagttggaattgggcct
ttaggaggaaatatgccatcatctgatgattcatttagtaaacgggataggagctctatg
tttaatgtaggtgtaaattctctagcagctatggcaaatagaacaggtttctctcagaat
agtagaggttttcctttacaaggtttaatgaacaatagtatgcagccaaataatttttct
tcaagtccaggtttaatgaacaacaacatgcagtcatataacttttctacaagtcccgca
ttagatctctctgaatttccttctctaacaaatcgaagttctcaagaaaattcaagtgcc
aatatgtcgcacaatccaatggctggtcggccaccttatgttggaatggtgaaacaacct
actaatgagtccaatgaatttcaaatacacagtgaagattttccagctctgccaggatct
caaactcaagaaagcaatcaagaaaatgtcaataaaacgacatctgggaggtgtttagaa
acatcaaaagattccaatcatttttcaaatgataaatcaagtgtaacacagaaaagagga
attcaaacatcaaaagatggtagagttactaacattccacccggtatggtgacggaccaa
tttggcatggtggggttgttaacattcatcagagcagcagaatcagaaccaaaattagtc
tctttagctttaggaagtgatcttacaacattaggtcttaatcttaatacgacagaaaat
ttatatcctaactttagtggtccttgggcggagcatccatgtagacctcaagacatagat
tatcatgttccagctgaatacttggttaatcaaagtatcagagataaattagccccagtg
aaattaaaccggtatggtgaagatcttttattttatttgttctacatgtttagcggagat
gtactacaaatagcagctgcagctgaactatataaccgtgactggagatttcacaaagat
gaaagagtatggatcacgagggttccaggaatgaaccctacagaaaaatgtgtttcattt
gagagggggatgtactattttttcgatgcagataactggaggaaagttgcaaaagaattt
cacctggactacgacaggctggaggacagaccaaacgtgccaccagcggtgtcaagttta
gcaccatcgcaggcagttctgacgtag
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