Parasteatoda tepidariorum (common house spider): 107441981
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Entry
107441981 CDS
T06106
Name
(RefSeq) RNA-binding protein 39
KO
K13091
RNA-binding protein 23/39
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptep03041
]
107441981
Spliceosome [BR:
ptep03041
]
Common components
Common spliceosomal components
General mRNP proteins
107441981
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_7
RRM_5
RBD_DEAH11
Motif
Other DBs
NCBI-GeneID:
107441981
NCBI-ProteinID:
XP_071036727
LinkDB
All DBs
Position
1:57197293..57222037
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AA seq
536 aa
AA seq
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MDDELDVEAMLDAPFAKQDARSVSPDHDKKKKSKKKKHSRSRSRERKNSHKEHKDTSHSK
NGHKSSRRDRSHSRERKDSSKSRRNEYPEKERRRVSRSPDRRRNYRSNYGGRNSYNARDY
QSRRTHRDIPRRRSRTRSPEKRRSSKTRVHSPSPKREDKGNDSADEFGKPARLHRNPDLT
PEERDMRTVFCMQLSQRVRARDLEEFFSPVGKVQDVRIIMDNKTRRSKGIAYIEFQETYS
VSLALDYSGKKLLGVPIIVQLTQAEKNRAAASMMSVQRGNVGPMRLYVGSLHFNITEEML
KGIFEPFGKIDKIELLKDTESGKSKGYGFVTFTDSESAKKALDQLNGFELAGRPMKVGTV
TDRTDIIQGPSFLDTEEMDRAGIDLGATGRLQLMAKLAEGTGLELPQAAVKALQLTAQAS
ASPMAGNPPVSVATQCFILSNMFDPSKENASNWDEEIRNDVIEECRNHGGALHVYVDKNS
GEGNVYVKCPNLTAATASVSALHGRYFAGRVIVAAYVPVVNYHMLFPDSATALVAL
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atggatgatgagttagatgtggaagctatgctagatgctccctttgctaaacaggatgcc
aggtctgtatcgcctgatcatgacaaaaaaaagaaaagtaaaaaaaagaaacatagcaga
agtaggagtagagaacggaaaaattctcacaaggagcataaagacacaagtcattctaaa
aacggccataagagcagcagaagagatagaagtcatagtcgagaaaggaaggattcatcc
aaaagcagaagaaatgagtatcccgaaaaagaaagaaggcgagtaagccgcagccctgat
cgaagacgcaattatcgaagtaactatggtggtagaaattcctataacgcaagggattat
caaagtcgacgtactcacagagatattcctcgacgcaggagcagaactagaagtccagag
aaaagacgctccagcaaaactagagttcactcaccttcaccaaaacgggaagacaagggt
aatgattctgcagatgaatttggaaaacctgctcgtctgcacagaaatcctgatttaaca
ccagaagaaagggacatgagaacagtattttgtatgcaactgtctcaacgtgttagagca
cgagatttggaagaatttttttcacctgtagggaaggttcaagatgttagaatcatcatg
gataataaaacaagacgctctaaaggaattgcttacatagaatttcaagaaacatattct
gtgtccttggcattagactattctggcaaaaagttactaggtgtgcctattattgttcaa
cttacccaagctgaaaagaacagagctgctgctagtatgatgagtgttcaacgtggcaat
gttggtccaatgagactttatgtaggatcactacattttaacataacagaagaaatgttg
aaaggaatttttgagccttttggaaaaattgataaaattgaacttctgaaagatacagaa
tcaggcaaatcgaaaggctatggatttgtaactttcactgattctgaaagtgctaaaaaa
gcattagaccaattaaatggatttgaattagccggcagacctatgaaagttggcactgtt
acggatcgcactgacattattcagggtccatcatttcttgatactgaagagatggataga
gctgggattgatctaggtgcaactggtcgtttacagttaatggctaagctagctgaaggc
actggtttggaattaccccaggctgctgttaaagctctgcaacttacagctcaagcatct
gcttccccaatggctggaaatccacctgtatctgtagctacccagtgtttcattttatct
aacatgtttgatccctccaaggaaaatgcatctaactgggacgaagaaataagaaatgat
gttattgaagaatgtagaaatcatggtggtgctcttcatgtttacgtcgataaaaactcg
ggtgaaggtaatgtttatgtaaagtgcccaaatcttacagctgcaacagcatctgtcagt
gctttacatggaagatattttgcaggtcgtgtgatagttgctgcatatgtacctgttgta
aattatcatatgctattcccagactcagcaacagcattagttgctctctga
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