Parasteatoda tepidariorum (common house spider): 107441998
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Entry
107441998 CDS
T06106
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107441998
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptep03041
]
107441998
Spliceosome [BR:
ptep03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
107441998
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_WDR5
WD40_Prp19
WD40
Beta-prop_WDR3_1st
Beta-prop_WDR3_2nd
WD40_CDC20-Fz
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_EML_2
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
NBCH_WD40
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
PRP4
Beta-prop_Aladin
Beta-prop_TEP1_C
ANAPC4_WD40
Beta-prop_WDR41
Beta-prop_EML
Beta-prop_EIPR1
Beta-prop_DCAF4
Ge1_WD40
Beta-prop_SCAP
Beta-prop_IFT122_1st
Beta-prop_Vps41
WD_LRWD1
Beta-prop_WDR75_2nd
eIF2A
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_ACSF4
Nbas_N
OspD
Motif
Other DBs
NCBI-GeneID:
107441998
NCBI-ProteinID:
XP_042910804
LinkDB
All DBs
Position
3:94473368..94497922
Genome browser
AA seq
521 aa
AA seq
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MSDDEELSYVKRTKIIHFGSLEEQERQKLEKEQQKEDESDDSKDESDEDDMGSPKEATSS
GNINVGDEYMELEEEMNKEKQLLLEEFERRKKARQINVSTDDFEVKANLRQIGEPLCLFG
EGPAERRERLRQILAKLGEDALKKQQEEEKKEEIKEKLTEKTWYHEGTQNLLKARQWIAA
YSIPRAKERLAVARTDQQEPDSLKNAKKQEQYKKLRSLNINCSQIGDKRPLSFCQFSPDS
KMLATASWSGLCKLWSVPDCELIRTLRGHNCNVGAIVFHPEATLTQSDTSVNMASCSTDG
TVKLWDLKSDEPIADLEGHAPHRVSRIIFHPSGRFLVTCVFDNSWRLWDLEVKEEILHQE
GHSKPVYDASFQCDGSLLATGGMDAFGRIWDLRTGRCIMFLAGHQNSVLSVCFSPNGYQV
ATGSADNTTKIWDLRRQKCEYTISVHTNLVSRVLFEKTHGDYLISTSYDNSLKVWSHPGW
TPIQTLCGHSGKVMGADISNDDRFIATASFDRTFKLWSPES
NT seq
1566 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatgacgaggagctttcctatgttaagagaacaaaaattatccattttggaagt
ttagaggaacaagagcgtcaaaaattagagaaagaacagcagaaagaggatgagagtgat
gatagcaaagatgaaagtgatgaagatgatatgggatcacctaaagaagccacttcatct
ggaaatattaatgtgggagatgaatacatggagctggaggaagaaatgaacaaagagaaa
caacttttattggaagaatttgagagaagaaaaaaagctcgtcaaataaatgtatccact
gatgattttgaagttaaagcaaatctacgacagattggagaaccattatgtttatttggt
gaagggcctgccgagcgtcgagaaagattgagacaaattttggctaagctaggtgaagat
gctcttaaaaagcaacaagaagaagaaaagaaagaagaaattaaggaaaaactaactgaa
aaaacttggtatcatgaaggcacccaaaatttgctaaaagctagacagtggattgctgcc
tattccattccaagagctaaagaaagacttgcagttgcaagaacagatcaacaagaacca
gattcactaaagaatgctaagaaacaggaacagtacaagaaattgaggtctttaaacata
aactgcagtcaaattggtgacaaaagacctctctccttttgccaattcagtcctgattct
aaaatgttagccactgcatcatggagtggtctctgtaaactatggtcagttccagattgt
gaattaattaggactcttagaggtcacaattgtaatgttggtgccatagtgtttcatcct
gaagcaactttgacccaatcagatacaagtgtcaacatggcttcatgctctacagatggc
acagttaaactttgggatctaaaaagtgatgaacccatagctgatttagaaggccatgct
cctcaccgggtatctagaattatattccacccttctggtcgatttctagtcacttgtgta
tttgataattcttggaggttgtgggatttggaagtaaaagaagaaatacttcaccaagag
ggtcacagcaaaccagtatatgatgcgagttttcaatgtgatggttctctattagctaca
gggggaatggatgcgtttggtcgcatttgggacttgagaactgggaggtgtatcatgttt
ttagctggtcatcaaaattctgtgctgtctgtttgcttttcaccaaatgggtatcaggtg
gcaacaggcagtgctgacaatactacaaagatatgggatttgcggagacagaaatgtgaa
tatactatttctgttcacaccaacctagtctcaagagtgctctttgaaaaaactcatgga
gattatttaatatcaacgtcatatgataattcattaaaggtttggtcacatcctggatgg
acaccgattcagacattgtgtggtcacagtggcaaagtcatgggtgccgacatatcaaac
gatgaccgttttatagccaccgcttcatttgacagaacttttaagctttggtcaccagaa
agctaa
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