Parasteatoda tepidariorum (common house spider): 107442286
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Entry
107442286 CDS
T06106
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep04382
Cornified envelope formation
ptep04512
ECM-receptor interaction
ptep04518
Integrin signaling
ptep04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107442286
04518 Integrin signaling
107442286
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
107442286
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
107442286
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptep04147
]
107442286
00536 Glycosaminoglycan binding proteins [BR:
ptep00536
]
107442286
Exosome [BR:
ptep04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107442286
Glycosaminoglycan binding proteins [BR:
ptep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107442286
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107442286
NCBI-ProteinID:
XP_071033644
LinkDB
All DBs
Position
2:46583292..46663881
Genome browser
AA seq
1776 aa
AA seq
DB search
MRSLWFHYSQTYCLSLIVIYSLLNCQLVDSAACKGCVQQPCICTGEKGLPGLQGLTGLQG
SAGHPGEIGPEGPIGPRGLKGDFGDAGAIGPRGIRGDTGVPGFEGTPGIPGLPGSDGPPG
EQGFPGCNGTDGAPGPPGFIGRPGTRGRPGSLGFQGPKGDPGDGGINSIGVKGEPGEAGY
PGVPGIQGLSGFSGEKGIRGDPGVTGIKGEVGDRGLKGIEGEGVAGPKGEKGEPGMPGSS
GPPGELEAVEPGDEVVYPLPGHTGHPGEKGEKGEHGHRGFDGRIGFDGQKGFAGPKGEKG
LRGDDGPLGKRGKAGFPGASGEKGQKGEPGDFGIDGREGYKGPKGEHGISGFPGSQGPPG
PPGIIIDTGEVIPGPRGKQGVPGDRGSPGVSGKPGLRGPVGYAGGPGEPGPQGDPGEPGT
IGLSFKGEPGEDGFPGIPGSRGRPGYPGLQGPSGAKGVPGISVIGPSGLDGRPGKDGVHG
LPGARGDPGPPGEKGYPGYGVTKQGPPGLPGLSGLPGEPGEPGIPGEDGRTGPIGPTGDD
CGFCPPGLPGFKGAPGDEGRPGPPGPPGYPGFIGLAGRKGEGGLPGIPGPKGFAGIPGSD
GSQGRPGYPGDPGELIFPGAVRGPKGERGDPGFEGAPGAQGRDGLQGLNGFPGFPGRKGE
VGAYGDPGQPGPNGIPGSPGASGMKGERGDDEYGLPGLPGERGSAGLEGLPGISGIKGEK
GEPYAYDFLKQYKGIQGPAGPSGAPGIPGRPGLEGKPGAPGLEGLPGMPGKKGDSGYPGS
SQRGEPGLKGYPGLPGDSGREGLRGSKGRRGEDGLFGLPGPKGDQGEVGIDGYEGPSGYP
GIVGLKGEIGESGTIGRVGFPGESGSAGLEGQKGEPGYDGLPGFPGEKGEPGDAGPGNKG
YPGLPGLPGYPGPLGDKGAPGLDGLPGLPGIKGMRGDEGAAGLRGPDGQSGRPGQPGFAG
KDGLPGLPGLKGEMGDMGTPGRQGSSGQSGLPGPIGRKGEVGEVGFPGLSGRPGLGGLPG
LPGDRGLPGFAGPKGEPSFFSDKGEPGDNGLTGLTGSPGRPGLPGLPGPKGVQGNPGRAL
NSDQGLQGFPGPKGYPGPAGLPGLKGGMGDMGFPGSDGVKGDPGLPGLPGQPGLDGIPGI
PGRKGEIGYSGLPGLQGLKGETGLEGLVGFPGPKGERGLSGFPGPDGFPGIKGERGDIGP
KGLASRTESKGLSGEPGLPGINGLPGIRGEDGFPGIPGLKGERGEPGFDGRPGSPGSPGP
KGYEGIPGLPGDEGIPGFGEEKGLPGDEGLAGLPGFPGLSGRKGEAGEPGLPGFPGIKGY
PGFGTPGIKGERGSPGPIGPPGLPGMLGLPGQRGDEGLPGLPGIPGDRGLPGIASPGERG
PVGLPGLDGFPGNVGPKGERGLPGLSGYPGSKGLQGDPGLPGLSGRRGQPGFPGLKGIPG
DAYAPEKITQIFGDRGDPGRPGLPGFPGERGPMGDPGIDGLQGLPGNPGLPGFDGLAGFP
GNKGMSGEPGFNGLEGLAGVSGATGDAGLPGLPGKAAASRGYFFTRHSQTSDIPECPFNA
PPMWTGYSLLYLQGNERAHGQDLGTPGSCLQRFSTMPFMFCNLNNVCNAASRNDFSYWLS
TAEPMTMSMTPIVGQEIRKYISRCSVCETPTQVIAVHSQTMDVPECPGGWDGLWIGYSFL
MNTDSGGEGIGQPLASPGSCLEDFRPLPFIECQGHGRCNYYTTAQSFWLATLDGMRTYEQ
PRPETLKAGDLRRKISRCQVCMRRHTPAINLGGRTA
NT seq
5331 nt
NT seq
+upstream
nt +downstream
nt
atgcgaagcctttggtttcactacagtcaaacatattgtttgtctctcattgtcatttat
tcattgctcaattgccaacttgtcgactcagcggcttgtaaaggatgtgttcagcaacct
tgtatatgtactggagagaaaggtcttcctggtcttcaaggtctaactggtttacaagga
tcagcgggtcatcctggggaaattggtcctgaaggacctattggtcctcgaggtttaaaa
ggagattttggagatgctggtgcaattgggccaagaggaattagaggtgatactggtgtt
ccaggattcgaaggtacacctggtattcctggccttccagggagtgatggtccccctggg
gagcaaggttttcctggctgcaatggaactgatggtgctcctggaccaccaggatttatc
ggtcgacctggaaccagaggcaggcccggctcacttgggtttcaaggtccaaagggtgat
cctggagacggtggaataaattcaattggagtgaagggagaacctggtgaagctggctac
cctggtgttcctggtatacaaggtctatcaggatttagtggggaaaagggaatacgtggt
gatcctggtgtaacaggtattaaaggtgaagttggcgatagaggtttaaaaggaattgaa
ggtgaaggagttgcaggaccgaaaggagaaaaaggtgaaccaggtatgccaggatcttct
ggtcctcctggagagttagaagctgttgaacctggagatgaagtggtttatccattacca
ggtcatactggacatcctggtgaaaagggtgaaaaaggtgaacatggtcatcggggattt
gatggtcgtattggatttgatggccagaaaggctttgctggacctaagggagaaaaaggt
ttgcgaggtgatgatggtcctttgggcaaaagaggcaaagctggttttcctggtgcatca
ggagaaaaaggacaaaaaggagaacctggagattttggaattgatgggagagaaggctat
aagggtccaaaaggagaacatggtatttcaggatttcctggttctcaaggtccacctgga
ccaccagggataataattgacactggtgaggttatccctggcccgcgaggaaagcaaggt
gttcctggtgatagaggctcaccaggggtttcaggtaaacctggattgagaggaccagtt
ggttatgctggaggtcctggtgaacctggacctcaaggtgatcctggggaaccgggtact
attggtttgagttttaaaggagagccaggagaagatggttttcctggtatacctggatca
agaggtcgacctggatatcctggcctacagggtcctagtggagcaaaaggcgttccagga
atttcagtcattggcccttctggtttagatggtcggcctgggaaggatggtgtgcatggc
ttacctggagcaaggggtgatcctggcccacctggagaaaaaggttatcctggttatggt
gtgacgaaacagggaccacctggtttaccgggtttatctggccttcctggggaacctgga
gaaccaggaattcctggagaagatgggagaacaggtcccattggtcctacaggagatgac
tgtggcttttgtcctcctggattaccaggatttaagggtgcaccaggagatgaaggaaga
ccaggtccaccaggacctcctggataccctggatttattggattagccggaagaaaagga
gagggtggtttacctggtattcctggccctaaaggatttgcaggtatacctggctcagat
ggtagtcaaggtcgtcctggttaccctggtgatcctggagaacttatatttcctggagct
gttagaggaccaaaaggagaacgaggggatcccggatttgagggtgctcctggagcacaa
ggaagagatggtttgcagggattgaatgggtttcctggatttccaggaaggaaaggagaa
gtgggtgcttatggagatcctggtcagccagggcctaatggaattccaggctcaccgggt
gcttcaggaatgaagggtgaaagaggagatgatgaatatggtttacctggtcttccagga
gaaaggggatcagcaggtcttgaaggactacctgggataagtggaataaaaggtgagaag
ggagaaccatatgcctacgattttctgaagcagtataaaggaatacaaggtcctgctggt
ccatcaggtgctcctggtatacctggccgtcctggacttgaaggcaagcctggtgcacct
ggccttgagggattgcctggtatgcctgggaagaaaggagattcggggtatccaggctct
tctcaaagaggagaaccaggcttaaaaggctaccctggattgcctggcgattctggtaga
gagggccttagaggatctaaaggaagacgtggtgaagatggtttgtttggtcttccagga
ccaaagggtgatcagggtgaagttggtattgatggatatgagggaccatcaggatatcca
ggaatagttggattgaaaggagaaattggagaaagtggaactattggcagagtaggtttt
cctggagaatctggaagtgcaggactagaagggcaaaaaggtgaaccaggatatgatggt
cttccaggatttcctggtgaaaaaggagaacctggagatgctggacctggaaataaaggt
tatccaggattgcctggacttccaggatacccgggaccacttggagacaaaggtgcacct
ggacttgatggattgccaggattaccaggtataaaaggaatgagaggagatgaaggtgca
gctggcttgagaggaccagatggacaatcaggacgtccaggacaacctggattcgctggc
aaagatggtttacctggactacctggtctcaaaggagaaatgggtgatatgggaactcca
ggacgacaaggttcatcaggccaatcaggtttacctggaccaattggaaggaaaggagaa
gttggtgaagttggatttcctggactttcaggaagacctggtttaggtggcctaccaggt
ttacccggggatcgtggtcttccaggatttgcggggcctaaaggagaaccatcatttttc
agtgacaaaggagaaccaggagataatggccttacaggcttaactggctcacctggtaga
ccaggcttgcctggccttccaggacctaaaggagtgcaaggtaatcctggccgtgcttta
aattctgatcaaggacttcaaggtttcccaggacctaaaggctatcctgggcctgctggt
ttacctggtcttaaaggtggaatgggtgatatgggttttccaggatctgatggagtgaaa
ggagatccaggattacctggccttcctggacaacctggacttgatggaattcctggtatt
ccaggtaggaaaggtgaaataggatattctggtctacctggcttgcaaggattgaaaggt
gagactgggcttgaaggtcttgttggttttcctggtcccaagggtgaaagaggtctttct
ggttttcctggacctgatggatttccaggaatcaaaggagaaagaggagatattggtcct
aaaggtttagcctcaagaactgagagtaaaggattatcaggtgagccaggtctaccggga
ataaatggtttgcctggaatcagaggagaagatggatttccaggtattcctggtttaaaa
ggagagcgtggtgagcctggttttgatggaagacctggaagtcctggcagtcctggccct
aaagggtatgagggtattcctggattacctggtgatgaaggtatacctggctttggagag
gaaaagggtttgccaggagatgaaggattggctggactgccaggatttcctggattatca
ggtaggaaaggtgaagctggagagcctggtttaccaggatttccaggcataaaaggctat
ccaggatttggaactccaggaattaagggagaaagaggcagccctggcccaatcggtcca
ccaggtttacctggaatgttagggcttccaggtcaacgaggtgatgaaggtcttcctgga
ttacctggcattcctggagatcgaggattaccaggaatagcctcacctggagaaagaggt
cctgttggtttgccaggtttggatggttttcctggaaatgttgggcccaaaggagaaaga
ggattacctggcttatctggatatcctggctcaaaaggactgcaaggggatcctggatta
cctggtttgagtggacgtagaggacagccaggtttcccaggattaaaaggtattcctggt
gatgcatatgctcctgaaaagataacacaaatatttggagacaggggtgatccaggaaga
cctggtttgcctggatttcctggagaaagaggtccgatgggtgatcctggtattgatggt
cttcaaggactcccaggaaatcctggactacctggttttgatggacttgcaggttttcct
ggcaacaaaggaatgtctggagaacctggatttaatgggttggaaggcctagcaggagta
agtggagcaacaggtgatgcaggactccctggattaccaggcaaagcagcagcctctcgt
ggttactttttcactaggcatagtcaaactagtgatattccagagtgtccattcaatgct
ccaccaatgtggacaggatattctcttttgtacctgcagggcaatgaacgagcacatggt
caagatttaggaacacctggaagttgtctacaacgtttcagcacaatgcctttcatgttc
tgcaatttgaataatgtttgcaatgcagcttcaagaaatgatttcagctattggctgagc
acagctgaaccaatgacaatgtccatgactcctatagttgggcaagaaattcgaaaatat
atcagccgttgttctgtttgtgaaacacctacccaggtcattgctgtacacagtcaaaca
atggacgtgccggaatgtcctggtggatgggatggattatggattggttacagcttccta
atgaatactgattctggaggcgaaggtattggccaacctctggcatcacctggctcatgc
cttgaagatttcagacctttgcccttcattgagtgccaaggtcatgggagatgtaattac
tatacaactgcccaaagcttctggttggctacacttgatggaatgaggacttacgaacag
ccccgtccagaaactttgaaagcaggagatttacgaagaaaaatttctcggtgccaagtg
tgcatgaggcggcatacacctgccattaacttaggaggaagaacagcttag
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integrated database retrieval system
