Parasteatoda tepidariorum (common house spider): 107442808
Help
Entry
107442808 CDS
T06106
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
107442808
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptep03400
]
107442808
DNA repair and recombination proteins [BR:
ptep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
107442808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_II
MutS_IV
MutS_I
DUF2452
AAA_27
Motif
Other DBs
NCBI-GeneID:
107442808
NCBI-ProteinID:
XP_042897659
LinkDB
All DBs
Position
2:complement(70171413..70211420)
Genome browser
AA seq
916 aa
AA seq
DB search
MSDASEFIKYFEELPKVGSLCRIFERSEDFFVYGDNATLTCKGLKVGVTRTLESDAGSLS
YVKIPKNSLVETVRFLLFYRHCCVEMLKNTGTARSQEWTVTAKASPGNTIAFEDILFAKD
NSYCMQQKGIIAVKMTTSSINLLVGIAYCDPVLREFHVCEFQDTPDFSILQSVLVQLSPQ
ECVLPLSAKQSETAPGTLKSIIETHKIAVTQKKSDVFEPLNTADVLRLFISSSDLEYNFE
EWQSSNKGCSLAAAIRYLELLSDENNFEQFQLIEFNTQLYARIDKACSVGLGLFAEKDSD
VDEKDYLYGFLNSCRTSAGERLLMQWIKQPLVDKIKIEERLDLVDIFVQDRTFMIEVQHF
LEKFVDIELLARKIHRRVINLQDFYKIHTVLTKIPNLSKYLSQYDGDKKAVLEHLINVPL
KEKIEELDKLREMIDDMIDFDAVENREYVIKPDFDENLKEMREEMENLQKSMKADLEKTK
TDLGLSTVKLELYERNGYAYRITLKEESNLRNKKQYTILTTGNSGVKFQSPALLRMSDNY
ATLKRDYEEIQKKIVIEMIAIAVPYTPHLKELSGTLSWLDVTVALAHKAANACNTYVRPI
ITEKDYFYLCLKDMRHPVLEEKLQNFIPNSVELSAQGKNFYFVSGPNMGGKSTYIRSVAI
NVLLAQIGSFVPCSSAEVSLTDAIYTRIGASDNPTSGISTFMHEMLEMQRMLKNGTSRSL
LIIDELGRGTSTADGYGLSHSISCEIAFRLKAPCLFATHFHELTSLSDTVPVIGNLHVEA
IQSEKEITFLYQVKEGVCTKSFGVHVAELTGFPPKVIEDANAKLIELENSIMTYEEVSNI
FGHLPNAEKLLTPLKGILPSKGEFLSSKDEAMEVDENTSTNGTAENNSSCFTETIELEKA
KELLRKLEEMEKAVFS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatgccagtgagttcattaaatactttgaagaacttcctaaggttggaagcttg
tgtcgcatttttgaaagaagcgaagatttctttgtatatggggataatgctacactgaca
tgcaaaggtctgaaagttggagttactagaaccttagaatctgatgctggatcattgagc
tatgtgaaaatacccaaaaacagtcttgttgagacagtgagatttttactcttttatcgt
cattgttgtgtagagatgcttaaaaatactggaactgccagatctcaagaatggactgtt
actgccaaagcatcaccgggcaatacaattgcttttgaagacattctctttgcgaaagac
aactcttactgcatgcagcaaaagggtatcatagctgttaaaatgactacttcatccata
aatctgcttgttggaattgcatactgtgatcctgtccttagagaatttcatgtttgtgaa
tttcaagatactccagatttttctattttacagtcagtattagtacagttaagtcctcaa
gaatgtgtcctaccactatcagctaaacaaagcgaaacagccccaggtactttgaaatct
atcattgagacacataaaattgctgtgactcagaaaaagtcagatgtctttgaaccttta
aatactgcagatgttcttcgattatttatatcttcatcagatcttgaatataattttgaa
gagtggcagtcgtcaaataaaggctgcagtcttgctgctgcaataagatatttagagtta
ttatcagatgaaaataattttgagcagtttcaactaattgaattcaacacacagctttat
gctagaattgataaagcttgttcagttggtcttggtttgtttgctgaaaaagattctgat
gtggatgaaaaagattatctatacgggtttttaaactcttgtcgaacaagtgccggtgaa
agattattaatgcaatggataaagcagcctttagtagacaagattaaaatagaggaacgt
ttggatttagttgatatatttgttcaagacagaacatttatgatcgaagtccaacacttt
cttgagaagtttgtagatattgagctccttgcaagaaaaattcaccgaagagtaatcaac
ttacaggatttttacaagattcatacggtactaacaaaaattccaaatctgtcaaaatac
ctttctcaatatgatggtgacaaaaaagcagtcttggaacatctcataaatgtcccattg
aaagaaaaaatcgaagaattagacaaactgcgagaaatgattgacgatatgatcgatttt
gatgctgttgaaaatagagaatatgttattaagccagattttgatgaaaatcttaaagaa
atgagggaagaaatggagaatttacaaaagtctatgaaagctgatttagaaaagacaaaa
actgatctaggtctttcaactgtaaaattagaactgtatgaaaggaatggttatgcttat
agaatcaccttgaaagaagaaagcaatttgaggaataaaaagcaatacactatacttacc
acaggaaacagtggagtaaaatttcagagtcctgctttactaagaatgagtgataattat
gcaacattgaagagagattatgaggaaattcagaagaaaattgttattgaaatgatagca
attgctgttccttacacgcctcaccttaaggaattgagtggtaccttatcctggcttgat
gtaacagttgctcttgcacataaagcggcgaatgcctgcaacacttatgtgcgcccaatt
ataactgaaaaagattatttttacttgtgtttaaaagatatgcgtcatcctgttctagaa
gaaaaattacaaaattttattcctaactctgttgaattgtctgctcaaggaaagaacttt
tattttgtttctggaccaaatatgggaggaaaatcaacttatattagatctgtggcaata
aatgtgcttttagctcaaatcgggtcctttgttccttgttcatcagcagaagtttctctt
acggatgccatttatactcgaataggagcttctgataatcctactagtggaatttcaaca
tttatgcatgaaatgctagaaatgcaacgaatgttaaaaaatggtacctccaggtcatta
ctcatcattgatgaattgggaagaggtacatcaacagctgatggttatggactttcacat
tctatttcatgtgaaattgcttttcgtttgaaagctccctgtttgtttgctactcatttt
catgagttgacgagtttgagtgatactgttcctgtgattggtaatttacatgttgaagct
atacaatctgagaaagaaataactttcttataccaagtgaaagaaggagtgtgcacaaaa
agctttggtgttcatgttgctgaacttactggtttcccacctaaagtcattgaggacgct
aatgctaaattaattgaactcgaaaacagcatcatgacttatgaggaagtatcaaatatt
tttggtcatttgccaaatgcagagaaacttttaacaccattaaagggtattcttccctct
aaaggagaatttttatcttcaaaggatgaagccatggaagttgatgaaaatacttcaaca
aatggaacagctgagaataactcatcttgctttactgaaactattgagttagagaaagct
aaagaattattacgtaaattagaagaaatggaaaaagctgtattttcttaa
DBGET
integrated database retrieval system
