KEGG   Parasteatoda tepidariorum (common house spider): 107443504
Entry
107443504         CDS       T06106                                 
Name
(RefSeq) U5 small nuclear ribonucleoprotein 40 kDa protein isoform X2
  KO
K12857  Prp8 binding protein
Organism
ptep  Parasteatoda tepidariorum (common house spider)
Pathway
ptep03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:ptep00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    107443504
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:ptep03041]
    107443504
Spliceosome [BR:ptep03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    107443504
 Complex C
   U5 SnRNP specific factors
    107443504
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WDR55 Beta-prop_EML_2 EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_SCAP ANAPC4_WD40 NBCH_WD40 Beta-prop_SPT8 WDR90_beta-prop_4th WD40_RFWD3 Beta-prop_DCAF4 Beta-prop_WDR19_1st Beta-prop_RIG_2nd Beta-prop_IFT140_1st Ge1_WD40 Beta-prop_Nup120_160 KNTC1_N WD_LRWD1
Other DBs
NCBI-GeneID: 107443504
NCBI-ProteinID: XP_042898905
UniProt: A0A2L2YGX3
LinkDB
Position
8:complement(59067917..59078222)
AA seq 345 aa
MPEKRSATDGVMVPFKKPRTDVIPGINDGPEPAGPHRSSNLLAPIMLLTGHQGEIFCGAF
HPEGNFLASGGFERDIFFWNVYGECDNVAVLPGHTGAVLDLKFSTDGSFLFSASTDKTVS
IWDAEVGVRIKKLKSHTSYVNSCSPARRGPQLICSASDDCTVKVWDARKRGTLHSFQDTY
QVTAVTFNDTAEQVISGGIDNVIKVWDMRKTGVLYKMMGHTDTITGLALSPDGSYILSNS
MDNTLRIWDIRPFAPQERCVKIFHGHQHNFEKNLLKCSWSQDGHKITAGSADRFVYVWDT
VTRRILYKLPGHNGSVNEVNFHPKEPIIMSCSSDKQIYLGEIEGS
NT seq 1038 nt   +upstreamnt  +downstreamnt
atgcctgaaaagagaagtgcaaccgatggtgttatggtgccttttaaaaagccaagaacc
gacgtaattcctggaatcaatgatggtcctgagcctgcggggcctcacagatcatcaaat
cttcttgctccaattatgcttcttacgggtcaccaaggagaaatattttgtggtgcattt
catccagaggggaattttttagcttcaggaggctttgaaagagatatatttttttggaac
gtgtatggtgaatgtgataatgttgctgtattgccaggacatacaggagctgttttggat
ctgaaattttctacagatggcagttttctattttctgcatccactgataagacggtcagt
atttgggatgctgaagtcggagtacgtattaagaagcttaaaagtcacacttcttatgta
aacagttgcagcccagcacgcagaggaccacaacttatttgtagtgcaagtgatgactgt
actgttaaagtgtgggatgcaagaaaaagagggacattgcattcttttcaagatacttat
caagttacagctgtaactttcaatgatactgctgaacaagttatatctggtggtatagat
aatgtaataaaggtctgggatatgagaaaaacaggtgttttatataaaatgatgggccat
actgatacaattacaggcttagcattaagtcccgatggttcatacattttgtctaactca
atggacaatactttgagaatatgggatattcgaccatttgctcctcaagaaaggtgtgtt
aaaatattccacggtcatcagcacaactttgaaaaaaatcttttgaaatgcagttggtcc
caagatggccacaaaatcactgctggctcggctgatcgctttgtctatgtatgggataca
gttacaagaagaatactttataaacttccggggcataacggatcagtaaacgaagttaat
ttccatcctaaagaaccaataattatgtcttgttctagtgataaacaaatttatttggga
gagattgagggaagctga

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