KEGG T06106: 107443617

Parasteatoda tepidariorum (common house spider): 107443617

Entry

107443617         CDS       T06106

Name

(RefSeq) roquin-1

K15690

RING finger and CCCH-type zinc finger domain-containing protein

Organism

ptep Parasteatoda tepidariorum (common house spider)

Brite

KEGG Orthology (KO) [BR:ptep00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:ptep03000]
    107443617
   04121 Ubiquitin system [BR:ptep04121]
    107443617
Transcription factors [BR:ptep03000]
Eukaryotic type
  Zinc finger
   Cys3His zinc factors
    107443617
Ubiquitin system [BR:ptep04121]
Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    107443617

SSDB

Motif

Pfam:

Roquin_1_2-like_ROQ ROQ_II zf-RING_5 zf-CCCH zf-RING_UBOX zf-C3HC4 zf-RING_2 zf-C3HC4_3 zf-CCCH_4 zf-C3HC4_4 zf-CCCH_UNK Prok-RING_4 zf-C3HC4_2 RING_XB3-XBAT31 PHTB1_N FYVE zf_CCCH_4

Other DBs

NCBI-GeneID:

107443617

NCBI-ProteinID:

XP_015913033

LinkDB

Position

8:67414952..67420368

AA seq 999 aa
MPVQAPQWTDFLSCPICYNEFECSVRRPISLGCGHTMCKSCLSKLQRKQCPFDQTVISAD
INQLPENYALLQLVGGRIPEKPPLVGSLVAIEDYKYYLEAKNCIEDLALYLKSSPPSIVN
GVPQSGPLSRPMQRKLVTLINCQLVEEEGRTRAMRATRSIGERSVTELILQHQNPQQLSA
NLWAAVRARGCQFLGPAMQEEVLKLVLLALEDGSSLSRKVLVMFVVQRLAPHFPQASKTS
IGHVVQLLYRASCFKVSKREGDSSLMQLKEEFRTYEALRREHDAQIVQIATEAGLRIAPE
QWSSLLYGETARKSHMQSIIDKLQTPQSFSQSVQELIIALQRTGDPGNLSVLRPYLELLA
NIDPSPDAPPPKWEELKMAQEAAKMVVKGLVDFVQNFGNRKLQEDRLNLNAKYKTSICRY
LTQRNNCPRGLNCTFAHSQEELEKYRAKSKRNSGGRSSVPSIRSPNPDSPHLQEASTCNP
SSSLSDAASECGISNYVFDSSFNLDNCTIEDSADSSSSIQFCNSDMNDSIISNSNMLQSN
HILNPDSPAFQPLSSKSPQVISLQSPYPALPRNNMLPPENVSPLSSPALSVVSNSVSGLP
GTKFKLSNKCLPPVINSSSLPSQNTAFALSYPIGHPMNSQSKDFRHSFPYKPFIKSQRLD
EQSLAALQERKEQLLAQLDKANIGKELSVKPQENGIIPSPTIEGSYCFVKTMDDGNVVSF
YSPWTSTSIFSCGSNTVCNNSDYTIVASSQSQFEGSTVKERTNGLSELNFTNCTLFWPSE
KDEFIPFDPPLVSKYGPISKCSKSLIRGPAPIQVNAVSHMGELTSPTSVVRHPLPSASLA
PTLNTASSVTYGAPIALISDQYMQTAAINCIDGTVCPLNENDLICIKTADGAAKYFRIDE
ESTDKNLGSLPVEEVLQYQEHTDSLKEELWEIEKTIEEKERSLNEGAHYLEHPYSKRYDL
KTGGTVPTSIGPWPSQTLENIPVKNSENLPLDLRTTFKD

NT seq 3000 nt +upstreamnt +downstreamnt
atgcctgtacaagcaccacagtggacggatttcttatcctgtccaatttgttacaatgag
tttgaatgcagtgttcgtcgcccaattagcttgggctgtggccatactatgtgcaaaagt
tgcttatcaaaactccaaaggaaacagtgtccatttgatcagacagttatatctgctgat
attaaccaattaccagagaattatgctcttttacaacttgttggtggtagaatacctgaa
aaaccacctcttgttggatcattggtggctattgaagactataaatattacttggaggca
aaaaattgcatagaagatttagctctctatctaaaatcatcgcctccaagtattgtaaat
ggggtaccccaaagtggtcctttaagcagaccgatgcaaagaaagttagttacccttatt
aattgccaacttgtggaagaagaaggtcgtacaagggcaatgcgagctacgagatcaatc
ggagagcgttcagtaactgaattaattcttcaacatcaaaaccctcagcaattatctgcc
aatttatgggcagctgttagggcaaggggctgtcaatttctaggtcccgctatgcaagaa
gaagtactgaagttagttttattagctttagaagacggatcctcactttctaggaaagtt
ttagttatgtttgttgtacaaagacttgcacctcattttccacaagcttcaaaaacaagt
attgggcatgttgtgcagttattataccgtgcctcttgttttaaagtgtcaaaacgggaa
ggagattcatcgttgatgcaactgaaggaagagtttcgcacttatgaagctcttaggaga
gagcatgatgctcaaatagttcaaatagctactgaagctggtttacgcattgcacctgag
cagtggtcttcacttttatatggtgagactgctcgcaaatcccatatgcagtctattata
gataaattgcaaacaccccaatctttttctcaaagtgttcaggaattgattattgctttg
caaagaactggagaccctggaaatctgtcggttttaaggccttatttggaattattggct
aatattgaccctagtccagatgctccaccaccaaaatgggaggagttaaagatggctcaa
gaagctgctaaaatggtcgttaaaggtctcgttgattttgtacaaaattttggtaatcgc
aagttgcaggaggatagattgaacctaaatgccaaatacaaaactagcatatgccgttat
ttaactcaacgcaacaattgcccccgtggccttaattgtacttttgctcattcacaagaa
gaattagaaaaatatcgagccaaaagtaaaagaaattctggtggaagaagttctgttcca
agtatcagaagccctaatcctgacagcccacatttgcaagaggcatctacttgcaatccg
tcatcatcactttctgatgctgcttcagagtgtggtatctctaactacgtgtttgattct
tcctttaatttagacaactgcacaatagaagattctgcagattctagttcaagtattcag
ttttgtaactccgacatgaatgacagcataatatctaactctaatatgctacaatctaat
catattttaaatccagactctcctgcctttcaaccattatcttcaaagtcacctcaagtt
atttctttacaatcaccatatcctgcattacctagaaataacatgttgccaccggagaac
gtctctcccttgtcgtcaccagcactcagtgtcgtttcaaattccgtctctggattacca
ggtaccaaattcaaattaagcaataaatgtttgcctcctgttattaacagttctagcctt
ccttcacaaaatacagcatttgctttatcatatccgatcggacaccctatgaattctcaa
agtaaggattttagacactctttcccttataagccttttataaagagtcaacggctagat
gaacagtcgttagccgcacttcaggaaaggaaagaacaactcttagctcagcttgataag
gcgaatattggaaaagaattgtcagttaaacctcaagaaaatggaattattccttcacca
actattgaaggatcatattgttttgtgaaaaccatggatgatggcaatgttgtgtccttt
tattctccttggacgtctacaagcattttttcttgtggatcaaatactgtatgtaataat
agtgactatactatagtggcttcatcacaaagccagtttgaaggttccactgtaaaagaa
agaaccaatgggttgtctgagctgaactttaccaactgtacgttattctggccttcagaa
aaggacgagtttattccatttgacccccctttagtgtcaaaatacgggcctatttctaaa
tgttccaaaagcttaattcggggtccggctccgatacaagttaatgctgtatcgcatatg
ggagaacttaccagtcctacctcagtagttcgtcatcctttgccatctgcttctttagct
cctactctcaatactgcttcatctgttacttatggtgcacccatagctttaatatcagac
caatatatgcaaactgccgctattaattgtatagacggtacagtatgtcctctaaatgaa
aatgatttaatctgcattaaaacagcagatggagcagcgaagtattttagaatcgatgaa
gaatccactgataaaaacttgggaagtttgcctgttgaggaagttttgcaatatcaagaa
catactgatagcttgaaggaagaattgtgggagattgaaaaaaccatagaagaaaaagaa
agatcattaaacgaaggagcacattatttagaacatccttatagtaaaagatacgatcta
aagacaggaggaactgtacctacttccataggaccctggccctctcaaactttggaaaat
attcctgttaagaattcagaaaatcttccattagacttaagaacaacattcaaagactaa

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