Parasteatoda tepidariorum (common house spider): 107443704
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Entry
107443704 CDS
T06106
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X2
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107443704
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptep03041
]
107443704
Enzymes [BR:
ptep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107443704
Spliceosome [BR:
ptep03041
]
Complex C
Other components
Step II factors
107443704
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
AAA_30
nSTAND3
T2SSE
Cas3-like_C_2
AAA_16
PhoH
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
107443704
NCBI-ProteinID:
XP_042908028
LinkDB
All DBs
Position
10:7089340..7135290
Genome browser
AA seq
1237 aa
AA seq
DB search
MEELRKLEYLSLVSKICTELDNHLGINDKDLAEFIISLAEKNNSYDGFKKALEENGAEFS
ESFSANLLRLIQTMMPKTEVKEEEDELKDVVKTELEKKKEKFPGLAIPNDKVKNLLDEED
ELIVGDALAQLEALAPGKKIKEEEISPDYKSKKHKKHKSSDKKRRHSRDRYDDRRYSRSR
SVSPSHSKKKYKRSRSRSPRKEDRKRKWSRSRSRSPRKDNRKRKWSRSRSRSPRKEDRKK
KWSRSRSRSSSPYFEKKTKHPSYDKKSERDKPPQLPLEPVVGEIYNGKITNIMQFGCFVQ
LEGLRKRWEGLVHISQLRREGRVTSVGDVVQKGQRVKVKVLSFTGQKTSLSMKDVDQDSG
KDLNPKVSIPESTRRSTQDLLRNPDRPSSFNLIPKVDDSDVDTRKHVQRISSPERWEIKQ
MLAANCVDISELPDFDDSTGLLPKEDDDDEDIEIELVEDEPPFLSGHGRANMQDLSPVRI
MKNPDGSLAQAAMMQSALAKERREQKQQQREAEMDSIPAGLNKHWIDPLPDAEGRTLAAN
MRGIGLSTQDLPEWKKHITGGSKASYGKKTQLTILEQRQSLPIYKLKDDLIKAVTENQIL
IVIGETGSGKTTQMTQYLSEAGFTARGKIGCTQPRRVAAMSVAKRVAEEFGCRLGQEVGY
TIRFEDCTSPETVIKYMTDGMLLRECLVDPDLKSYAVVMLDEAHERTIHTDVLFGLLKNA
VKRRPELKLIVTSATLDAVKFSQYFFEAPIFTIPGRTYPVEILYTKEPENDYLDASLITV
MQIHLTEPVGDILLFLTGQEEIDTACEILYERMKSLGPKVPELIILPVYSALPSEMQTRI
FEPAPLGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQNVYNSKTGMDSLVVTPISQAQA
KQRAGRAGRTGPGKCYRLYTERSYRDEMLTTPVPEIQRTNLAATVLQLKAMGINDLLSFD
FMDAPPPESLIMALEQLHSLSALDDEGLLTRLGRRMAEFPMEPSLSKMLIMSVHLGCSEE
ILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQPEGDHLTLLAVYNSWKNNKFSNAWCYE
NFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSCGKTTARVQKAICSGFFRNAAKKDPQEGY
RTLVDGQVVYIHPSSALFNRQPEWVVYHELVQTTKEYMREVTTIDPKWMVEFAPAFYKFA
DPTKLSKHKKQLRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3714 nt
NT seq
+upstream
nt +downstream
nt
atggaggaattgcgcaaattagagtatctctcacttgtgtcaaagatttgtacagagctt
gataatcatttaggaattaacgacaaagatttagctgaatttataatttcattggctgaa
aaaaacaactcatatgatggatttaaaaaagccttggaagaaaatggagcagaattttcg
gaatcattttctgcaaacttgctacgtcttatacagacgatgatgccaaaaacagaagta
aaggaggaggaagatgagttaaaagatgttgttaaaacagaactagagaagaaaaaggaa
aagttccctggtctagccattcctaatgataaagtcaaaaatttgttagatgaagaggat
gaattaattgtaggcgatgcactggcacagttagaagctttagctcctggaaaaaaaata
aaagaagaggaaatttctcctgattacaaaagcaagaaacataaaaaacataaaagttct
gataagaaaagaagacattctcgtgatcgctatgatgataggagatattcaagatcacga
tctgtgtcaccatctcattctaaaaagaagtacaagcggtcaagatcacgttccccgaga
aaggaagacagaaagagaaagtggtcaagatcaagatcacgttctcctaggaaagataac
agaaaaagaaagtggtcaagatcaagatcacgttctcctagaaaagaagacagaaaaaag
aaatggtctagatcgcggtcaagatcttcctcaccttactttgaaaagaaaactaagcat
ccttcctatgataaaaaatctgaacgtgataagccacctcagctacctttagaaccagtt
gttggagagatctataatggcaaaattacaaacataatgcagtttggttgttttgtacag
ttggaaggactcaggaaacgctgggagggattggtacacatatctcaacttcgcagagaa
ggccgtgttacaagtgttggggatgttgtccagaaaggacaaagagtgaaggtcaaagtt
ttatctttcactggacaaaaaactagtttatctatgaaggatgttgatcaagattctgga
aaggatttgaatcctaaagtttctattcctgagtctactcgcagatctacgcaagacttg
ttgagaaatccagacagaccgtccagttttaatctcatacccaaagtggacgatagtgat
gtggacacaaggaaacatgtccaaagaatatcatctcctgaaagatgggaaattaaacag
atgcttgctgccaattgtgttgacatatccgaattgccagattttgacgattctaccgga
ttgttacccaaggaggatgacgatgatgaggacatagaaattgaattagtggaagacgaa
ccccctttcctatctggtcatggtcgagcaaacatgcaagatcttagcccagttagaatt
atgaaaaatcctgatggatcattggcacaagcagccatgatgcagtcagcccttgcaaaa
gaacggagagagcaaaaacagcaacaaagagaggctgagatggactccattcctgctgga
ttgaacaaacattggattgatcctttacctgatgctgaagggcgtacactggcagcaaat
atgaggggtatcggattgtcgactcaagatttgccagaatggaagaaacatatcacaggg
ggctctaaagcatcctatggaaagaaaactcagctcaccatcctagaacaaaggcaaagt
cttccaatctataaattgaaagatgacctgattaaagctgtaactgaaaatcaaattctt
attgtcattggtgaaactgggtctggaaaaacgacccagatgactcaatatttatcagaa
gctggtttcactgcaagaggaaagataggttgcacacagcctagaagagttgcagctatg
tcagtcgcaaaaagagtcgctgaagaatttggctgccgattgggccaagaggttggttac
accatccgttttgaggattgtactagccctgaaactgtcatcaagtacatgacagacggt
atgttgctgagagagtgtcttgttgaccctgacctgaaaagttatgcggttgtgatgttg
gacgaagctcatgagaggacaattcacactgatgtgctgtttggtctattgaaaaatgct
gtgaagcgcagaccagaactgaaacttattgttacatctgccacattagatgctgtgaaa
ttttctcagtatttctttgaagcacctatatttaccattcctggacgtacatatcctgtg
gaaattttatatactaaagaaccagaaaatgattatttggatgcttctttaatcacagtt
atgcagatacatttaactgaaccagtaggtgatattttgctttttttgactggtcaagaa
gaaatcgatacggcctgtgaaattctatatgaaagaatgaagtcattaggcccaaaagta
ccagaactgatcatactacctgtttattctgctttaccaagtgaaatgcagactcgcatt
tttgaacctgctcccttaggatcaagaaaggttgtaatagctacaaatatagctgaaaca
tcccttactatagatggcatttattatgtagttgatccaggattcgtgaaacagaatgtt
tataactctaaaacaggaatggattccttagttgttacacctatatcacaggctcaagct
aagcaaagagctggccgtgcaggaagaacaggtccagggaaatgttatcgtctctacact
gagaggtcgtacagagatgagatgctgaccactccagtaccggagatccagaggacaaat
ctcgcagccactgttctgcagctcaaagcaatgggaataaatgacctgctgtcatttgac
tttatggacgctcctccaccagagtctctgataatggctcttgaacagttgcattcctta
agtgctttggatgatgaagggcttttaacacgacttggacgacggatggcagaatttcct
atggaacctagtctttcaaaaatgcttataatgtcagtgcatttgggttgcagtgaagaa
attcttacaattgtttctatgttgtctgttcaaaatgtattttaccgaccaaaggacaag
caagctttagctgatcaaaagaaggcaaaatttaatcaacctgaaggagatcatctaaca
ctgcttgctgtttacaactcatggaaaaacaacaagttttctaatgcttggtgttacgaa
aattttgtgcagatcaggacactgaaaagagctcaagatgtccggaaacaactattagga
atcatggatcgacataaattagatgttgtatcgtgtggcaaaacgacggctcgtgttcaa
aaggctatctgcagtggtttctttcgaaatgcagctaagaaggatccccaggaaggctac
agaactttggtagatggacaggttgtttacattcatccttccagcgctctattcaatcgt
caaccagagtgggttgtgtatcatgaattagtccagactactaaagaatatatgagagaa
gttacaacaattgatcctaagtggatggttgagtttgctcctgcattctacaaatttgct
gatccaactaaacttagcaaacacaagaaacaactaagattagaacctttgtacaataaa
tatgaagaaccaaatgcctggagaatatcaagagtcaggaggagaagaaattag
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integrated database retrieval system
