Parasteatoda tepidariorum (common house spider): 107444116
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Entry
107444116 CDS
T06106
Name
(RefSeq) probable ATP-dependent RNA helicase DDX5
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107444116
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptep03041
]
107444116
03009 Ribosome biogenesis [BR:
ptep03009
]
107444116
Enzymes [BR:
ptep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107444116
Spliceosome [BR:
ptep03041
]
Complex A
U1 snRNP components
U1 related factors
107444116
Complex B
107444116
Ribosome biogenesis [BR:
ptep03009
]
Eukaryotic type
Pre-60S particles
Helicases
107444116
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
P-loop_SecA
Cas3-like_C_2
SecA_DEAD
Topoisom_I_N
Motif
Other DBs
NCBI-GeneID:
107444116
NCBI-ProteinID:
XP_071036527
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All DBs
Position
4:complement(762297..787365)
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AA seq
550 aa
AA seq
DB search
MLRHSCFHACNVVDLCKFSSLLSKHIVLDKRCFHKYDEDNSSRNSGYKRRQFNKPGFKYN
KQSVNRNFLNENSRFNQSLGQELKQATFNECDLEPIEKYLYVEHANVTQRSDEETAFYRK
DSNITITGSDVPKPILNFEELCLPENLKRVILGQGYSEPTAIQAQGWPIAMSGRDMVGIS
QTGSGKTLVFMIPAVVHALNQPSFKTNCNECSPQVLVLAPTRELVQQIYQVSGPFCSASN
LIAACAYGGASRNVQLQCLRGAHLCIATPGRLIDFVSEGVVNLKRCTYLVLDEADRMLDM
GFEPQIRQIVGQLRPDRQTLMWSATWPQEIQSLAEDFLKDYVKVTVGEGRLVANPKIKQN
IYIVEEFDKEDKLVSLLKEIHSGKKSNKVLVFAQTKRTVDYLGAKLNRLGIKSYTLHGDI
SQTKRDFVLNQFRSRDCILIATDVAARGLDIVDVQHVVNYDFPPNIEDYIHRIGRTARGV
SSGVSHSFFTSDNVGVASELVDVLNQAKQIVDPKLYSLIGQKHQRHYRGNQSKPGFNSRP
FQRQRFNYSF
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgacattcatgtttccatgcttgcaatgttgttgatctgtgtaaattttcttct
ttactatcaaagcatatagtcttggacaaaagatgtttccacaaatatgatgaagataat
tcttctcgtaacagtggttataaaaggagacagtttaataagcctggtttcaaatacaac
aaacaatctgtgaacagaaactttttaaacgaaaattctagattcaatcaaagtttggga
caagagttaaagcaagctacatttaacgaatgtgatttggagcctattgaaaagtatctg
tatgttgaacatgccaatgtcactcaacgatctgatgaagaaactgcattttatagaaaa
gattccaacatcacaattactggatcagatgttcccaaaccgatattaaattttgaagaa
ttgtgcttgcctgaaaatttgaagcgagtaattctcggtcagggttattctgagcccact
gccatacaagctcagggatggcctattgcgatgagtggtagagatatggttggaatttct
caaacaggatcaggaaaaactttagtttttatgattcctgctgtggtgcatgctcttaat
caaccctcgtttaaaacaaactgcaatgaatgttctccacaggttcttgtattggctcct
actagggagcttgttcagcaaatatatcaagtgagtggtccattctgtagtgcctcaaat
cttattgctgcttgtgcatatggtggtgcatctaggaatgttcaactgcaatgcttaagg
ggagctcatctatgcatcgctacccctgggaggctgattgattttgtatctgaaggtgtg
gtcaaccttaagaggtgtacttatttagttcttgatgaagcagatagaatgttggatatg
ggtttcgagcctcaaataagacagattgttggacagctcaggccagatcgacagacgctg
atgtggagtgcgacgtggccccaggaaatccaaagtttggccgaagacttcctaaaagat
tacgtaaaagtgaccgtgggtgaggggagactcgtggcaaatcctaaaataaaacaaaac
atatacattgtggaagaatttgataaagaagacaagcttgtgtccttattaaaagaaatt
cactctggaaaaaaatcaaataaggttttggtatttgctcagacaaaaagaacagttgat
tacttgggagcaaaattaaatcgtttaggaataaagtcttacactttacatggtgacatc
tcccaaacaaagagagattttgtcctgaatcaatttcgatctagagattgcattttgatt
gctactgatgttgcagctcgtggactagatattgttgatgttcaacacgttgttaattat
gacttccctccaaacattgaagattacatccacagaataggacgaacagctcgaggagtc
tcgtctggagtttctcattccttcttcacttcagacaatgttggtgttgcttctgaactc
gttgatgtcttaaatcaagcaaagcaaatcgttgatcctaaactctactcattgattggg
caaaaacatcaacgtcactacagaggtaaccaatctaaaccaggcttcaattcaagacca
ttccaacgacaaagatttaactattccttctga
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