Parasteatoda tepidariorum (common house spider): 107444730
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Entry
107444730 CDS
T06106
Name
(RefSeq) cleavage stimulation factor subunit 1
KO
K14406
cleavage stimulation factor subunit 1
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107444730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107444730
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
107444730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_THOC3
WD40
WD40_Prp19
Beta-prop_WDR3_1st
WD40_CDC20-Fz
CSTF1_dimer
WD40_WDHD1_1st
Beta-prop_WDR3_2nd
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_WDR36-Utp21_1st
EIF3I
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
Beta-prop_EML
WD40_RFWD3
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
NBCH_WD40
Beta-prop_Aladin
WD40_MABP1-WDR62_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_IFT140_1st
Beta-prop_SPT8
Ge1_WD40
Beta-prop_HPS5
Beta-prop_WDR35_TULP_N
Cytochrom_D1
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_NWD2_C
Frtz
Motif
Other DBs
NCBI-GeneID:
107444730
NCBI-ProteinID:
XP_015914430
LinkDB
All DBs
Position
4:complement(21422067..21440890)
Genome browser
AA seq
432 aa
AA seq
DB search
MAKMTVGHKERETLYRLIISQLFYDGHQTFAVTLTNSLKTNPPCPPSDRLMHLVTLGLRA
EMDNKEHNAMRVDAPNVGLGIDLEYETDAPSLAPEPALYETCYVTSHKAQCRAGAFSSDG
QLVATGSFDASIKILDVDRMLAKSATPAEVAAQETTQQNMETHPVIRTLYDHIEEVTCLE
FHPTEQILVSGSRDYTVKFFDFSKPSVKRAFRTIHEAEVVRCLSLHPSGDYILVGTQHPV
LRLYDVRTSQCFVSDCAEMQHKAPINMVKYSPNANMYATCSKDGDIKLWDGVSSRCINTF
AGAHDGSEVCSVQFSRNSKYLLSSGKDSLVKLWELSMARCLIAYTGAGATGKQTHRSQAV
FNHTEDFVLFPDEKTTSLCSWDARNAERQRLLSLGHNNTVRYIVHSPASPAFVTCSDDFR
ARFWYRRTESGD
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaatgactgttgggcataaagaaagagaaacactttatagactgattattagc
caacttttttatgatggacatcaaacatttgctgtgacattgactaattccctgaaaacc
aacccaccctgtccaccctcagataggctcatgcatctagtaactcttggtcttcgagca
gagatggacaataaggaacacaatgcaatgagagttgatgctcctaatgtaggacttgga
attgatttggagtatgaaactgatgctccatctttagcaccggagcctgcattatatgaa
acttgctatgttacttctcataaagctcaatgccgtgcaggtgcctttagcagtgatggg
cagttggtggctactggatcttttgacgcctcaataaaaattttagatgtagacagaatg
ctagctaaaagtgctactcctgccgaagttgctgcccaagaaacaactcagcagaacatg
gaaactcatcctgttattcgtactttgtatgatcatattgaggaagttacttgtttagaa
tttcacccaactgaacaaatccttgtatcaggaagccgtgattacacagtgaagtttttt
gatttttctaagccatcggtgaagcgagcttttaggactattcatgaagctgaagttgta
agatgtttatctttgcatccatctggcgattatattttagttggaactcaacaccctgtc
ttacgtttgtatgatgtacgaaccagccaatgctttgttagtgattgtgctgagatgcag
cataaagcccctattaatatggtcaaatatagccccaatgcaaatatgtatgccacctgc
tctaaagatggtgacataaaactgtgggatggagtgagcagcagatgtataaatactttt
gctggtgcacatgatgggagtgaagtttgttctgtgcagttctctcgaaattcgaagtac
ctattaagtagtggaaaagattcattggtaaaactatgggaactgtccatggctcgttgt
ctcatagcctataccggagctggagctactggaaaacaaactcatcgtagtcaagcagta
tttaaccatacagaagactttgttctttttcctgatgaaaaaacaactagtctatgcagt
tgggatgcgcgaaacgccgaacggcaacgtctattatctctcggtcataacaataccgtt
cggtatattgtgcattccccagccagccctgcttttgtgacttgtagcgatgacttccgt
gctcggttttggtacaggcgaacagagtctggcgactaa
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