Parasteatoda tepidariorum (common house spider): 107444977
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Entry
107444977 CDS
T06106
Name
(RefSeq) RB1-inducible coiled-coil protein 1 isoform X1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107444977
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
ptep01009
]
107444977
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptep04131
]
107444977
03029 Mitochondrial biogenesis [BR:
ptep03029
]
107444977
Protein phosphatases and associated proteins [BR:
ptep01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
107444977
Membrane trafficking [BR:
ptep04131
]
Autophagy
Autophagosome formation proteins
ULK complex
107444977
Mitochondrial biogenesis [BR:
ptep03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
107444977
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG17_like
ATG11
TBK1_ULD
DUF5798
AHSP
Motif
Other DBs
NCBI-GeneID:
107444977
NCBI-ProteinID:
XP_042905065
LinkDB
All DBs
Position
3:88820131..88876593
Genome browser
AA seq
1494 aa
AA seq
DB search
MLYVFIVSSGRMMQFEMSLAVKKVLELKNEIARRAKIPQEKQVLLCSGGEELMPDNIVGH
YKGAGTDTNPIFLFSKCVTEMEPYSSHLNTSAESSIESDVNDCANMQPTIATATVSIALA
QRFAESASKGREECEELVHSQHLQQQGWAAVIANLEDVKEILEKRKEKFEILYQNYMTNR
SSFLETIYMFPSNIELLAKIPLISKLIIDNTDEDLITNHTLLSWFVTEPREVLEALVDKC
HHLLEEYNEHTIIGINEEFERVLKNVDNPDIKEIKGIGERLTRLNAQIQDARKLEKDQID
LALKFKKFHAMIANDHQILPDLCKTLHGQLEIMLENHKCLREILNRCTNAKLELSGHINF
RLKYIGTYEDEMYRLHTRVTLLENHIQSVMSQVESFRQVQIAPERYLKMLAEVCRRKTFS
ASFMKWAEDLSSQASKVYHKEIDIRKSFSSSETKNMVDNLFPGMSDVPPKFAVECPSPFD
QNLPNIGKEDLEWLKINLPELSHFCEVIPVDPMPYVSQTESDSAFSSNVPFSRVASDSAG
VSEKVHDTKELPIDKLAVPSGDFSSLPSEYASLPNEVFSLTSSPFEDPMLPSHMQEQRTK
QLQVSLKGPYGDQTNIADSDGEEFETVDHYRMSPVAATSQSAYGLRARPPSSSDVIDVNT
HPKHSPRVVKARSDGDAVSPMQERLKSPDSLAISTDFQAAEYYIDDSMPSSYTESNATSP
LMRGNRMVKSHHVVVAELQRQVDEKSGALVVTKSSLENTHSNILKLHAKLSALQKFIQEL
HGSFRSDFSNFKASVTEDLCDKMAEVSQVVDHINTYIGKVEQQMISDKDTAISEMKQEFS
SIESSYLRKLEVENQKLSDAENQIVYYEDHLKGLRHSYEETKHEKEMLESELQEKKELIQ
RMMLEHEVEFDSFKNSVKEQLQSQELEINQLKQSLSQAILEVTKLEGEKTVIEKESQERH
NIVSSMQDQHDKLKEEFHRLQVENRSVKSLQEFEKKLDDALKEKNIYIQELENAKEELQK
CKDEMEKMKTNELKDLEEKLSVKHKNDLDSLRSRFKLAVSMTSLEKLPSSSSPDFGDTES
LECLEELQKIIAESREKWESVKLNIAKEEHAKELNALKESFEESQLKHEEEKVQIIAAMR
SKHENALEKLKSRITAENQVSFNEAINSLAKEKDAIIENLRSSISVLEAKQIALKTYLDQ
FRPSLSPIIGEDVITQSETGATSACARSADELFYFNKFKTDVEALLQLTDTTKKPYQQTR
SSSDSYESLRKKLKIKEEEYSGLLSKFMSSSASISRTPCVHCSNKLSILTCEPGETVLVC
YEDKLEHYIIFHLGNYLHFLHSDSIASLDLKSPGESQRWIIGTVTHKEFCVTKKVNNRFK
LTLGTKFYRVKIEKWSCGVAATRTTAAALQRSIQISSTEQQPQTASAIRNSEQTATQTQP
ACIAQTVDSTELTPSTSFIQASISEQQLSSQSIIEVQNIQPTSSGVSQMSSSDI
NT seq
4485 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacgttttcattgtaagctctggaagaatgatgcagtttgagatgagtcttgca
gtaaaaaaagtacttgagttaaaaaatgagatagcaagacgtgcaaaaattcctcaagaa
aaacaagttctactgtgcagtggaggggaagaactaatgccggataatattgtcggacat
tataaaggtgctgggactgacaccaatcccatattcttattcagcaagtgtgtgactgaa
atggaaccatattcatcccatttaaatacatctgctgagtcgagcatagaaagtgatgtg
aatgattgtgcaaatatgcagcccactattgcaactgctacagttagtatagcattagcg
cagcgttttgctgaatcggctagtaaaggaagagaagaatgcgaggaattagttcacagt
cagcatcttcaacaacaaggctgggcagcagtcatagcaaacttagaagacgttaaagaa
atattagagaagcggaaagaaaaatttgaaattctgtatcagaattatatgactaatcgg
tcctcttttttggaaacaatttatatgttcccttctaatattgaattacttgctaaaatt
cctttgatttctaaattaattattgataatacagatgaagatttaattacaaaccatacc
ttgctatcatggtttgttactgagcctagagaggttttagaagctttagttgacaaatgt
catcatttacttgaagagtacaatgagcatacgattattggtattaatgaagagtttgaa
cgagttttaaaaaatgtagataatcctgatattaaagaaatcaagggcattggtgaaaga
ttaactcgtcttaatgcacagatccaagatgctaggaaactggagaaagatcaaatagat
ctagctttgaagtttaaaaagtttcatgctatgattgcgaatgaccatcaaatcttgcct
gatttgtgtaaaactctccatggtcagctggagataatgctggaaaatcataagtgcctt
agagaaattttaaatagatgcacaaatgctaaattggaattgtctggtcacataaatttc
cgattaaaatacattggcacctatgaagatgaaatgtatcgactacatacaagagtgacc
cttctagaaaatcatattcaatctgtaatgagtcaagtagaaagtttccgtcaggtacag
attgcccctgagcgttatcttaagatgttggctgaagtttgtagaagaaaaaccttttca
gctagttttatgaagtgggcagaggatctatcttcacaagcttccaaagtgtatcacaaa
gaaatagatatacggaaaagttttagtagtagtgagactaaaaatatggttgataatttg
tttcctggaatgagtgatgttcctcctaaatttgctgttgagtgcccttcaccatttgac
caaaacttgcctaatattggtaaggaagatctagagtggctgaaaataaatttaccagag
ctttctcacttctgtgaagtgattcctgtcgatcccatgccatacgtctctcaaactgaa
tcagactctgctttcagtagcaatgtacctttctcccgtgttgccagtgactccgcaggt
gtttcagagaaggttcacgatacgaaagaactgcccatcgacaaactcgctgttccttct
ggagatttcagtagtcttcctagtgagtatgccagcctacccaacgaagttttcagcctt
acttcgagtcctttcgaagatcccatgctaccgtctcacatgcaagagcaacgcacaaag
caactgcaagtttcgttaaaaggtccatatggggatcaaactaatattgctgattctgat
ggtgaggaatttgaaactgttgatcactacagaatgtcccctgtggcagctacctctcag
tctgcttatggtttgagggcccgtccaccaagttcatcagatgtgatagatgtaaatact
catccaaagcatagtcccagagtggtcaaagcacgcagtgatggagacgccgtatctccc
atgcaggagcggttaaagtctccagactctttagcaatatcaacagactttcaggctgct
gagtattacattgatgattctatgccgtcctcctatacagaaagcaatgcaacatcacct
cttatgcgaggtaataggatggtgaaatcacatcatgtagttgtagcggaactgcaacga
caggtggatgaaaaaagtggtgctttagtggtaactaagagttcactggagaatacccac
tccaatatactgaagctgcatgccaaactatctgcattacagaaattcattcaggagctt
catggcagttttcggagtgatttctctaatttcaaggcctctgtgacggaagatttgtgc
gataaaatggctgaggtttctcaagttgttgatcatattaatacctatattgggaaagtt
gaacagcagatgatctcagataaggacactgcaatatctgaaatgaagcaagagttttcc
tcaattgaaagctcatacttaagaaaacttgaagttgaaaatcagaagctgagtgatgct
gaaaatcaaatagtttattatgaagatcatttaaaaggcttacgtcacagttacgaggaa
acaaaacatgaaaaagaaatgcttgagtctgaacttcaggaaaagaaagagctaattcaa
cgcatgatgttagaacatgaagttgagtttgattctttcaaaaattctgtaaaagaacaa
ctccaaagtcaggaattggaaataaatcaattgaaacagagtctttctcaggccattttg
gaagtgactaaactggaaggtgaaaagactgttattgagaaagaatcacaagaacgtcat
aatatcgtatcatctatgcaagatcaacatgataaattgaaagaagaatttcacaggttg
caagtagaaaaccgcagtgtaaaaagtctgcaggaatttgaaaagaaactagatgatgct
cttaaagaaaaaaatatttatatacaggagctggaaaatgctaaagaggagctacaaaaa
tgtaaagatgagatggagaagatgaaaacaaatgaattgaaggatttagaggagaaattg
agcgtcaaacataaaaatgatttagactctctcaggtctcgctttaaattagcagttagc
atgacctctctggaaaaacttccgtcttcaagttctcctgattttggtgatacagagtct
cttgaatgcttagaggaattacaaaaaatcatagctgaaagtcgagaaaaatgggaatct
gttaaattaaacatagccaaagaggaacacgccaaagaacttaatgccttgaaagaatct
tttgaagagtctcaacttaaacatgaagaagagaaggtgcagattattgctgcaatgcga
tcaaaacacgagaatgctttagaaaaactcaaatcacgtataactgcagaaaaccaggta
tcatttaatgaagcaattaacagtttagccaaggagaaggatgcaattattgaaaatttg
cgctcctctatatcagtattggaagctaaacaaattgcgctcaaaacttatttagatcag
ttccgaccttcgttgtctcctataattggtgaagatgttataactcaaagtgaaactgga
gccacaagtgcttgtgcaagaagtgcagatgaactcttttattttaataaattcaaaacc
gatgttgaagccttattacaactgactgatacaacgaaaaaaccatatcaacaaacacgc
agctcttctgattcctatgagagcttaagaaagaaacttaaaataaaagaagaagaatat
agtggccttttatcaaaatttatgagttcaagtgccagcattagtagaacaccttgtgtc
cattgttccaataagctatccattttaacatgtgaacctggagaaactgtacttgtgtgc
tatgaagataagctagagcattacattatatttcacttggggaactatcttcattttctt
cattcagatagcattgcttctttggatctaaagagtccgggagagtcacagagatggata
ataggaacagtaactcataaagaattttgtgttactaaaaaggttaacaacaggttcaaa
cttacactcggaactaaattttaccgtgtgaagatcgaaaaatggagttgtggggttgct
gccactcgtactacggcagctgctttacaacgtagtattcaaatttcatccactgagcaa
caaccacaaactgcttcagccattcgaaattcagagcaaactgcaacacagacacaacca
gcttgtatagctcaaactgtagatagcacagaacttactccttcaacttcctttatccaa
gcatccatttctgagcaacagctatcttcccagtccattatagaggtgcaaaatattcaa
cctacttcttctggagttagtcaaatgtcaagttcagatatatga
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integrated database retrieval system
