Parasteatoda tepidariorum (common house spider): 107446879
Help
Entry
107446879 CDS
T06106
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107446879
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ptep03041
]
107446879
03009 Ribosome biogenesis [BR:
ptep03009
]
107446879
Enzymes [BR:
ptep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
107446879
Spliceosome [BR:
ptep03041
]
Complex A
U2 snRNP components
U2 related factors
107446879
Complex B
107446879
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
107446879
Ribosome biogenesis [BR:
ptep03009
]
Eukaryotic type
90S particles
Helicases
107446879
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
AAA_22
AAA_19
DEAD
SRP54
nSTAND3
Cas3-like_C_2
CRR7
PhoH
ABC_tran
AAA_30
AAA_25
DUF763
Motif
Other DBs
NCBI-GeneID:
107446879
NCBI-ProteinID:
XP_015917140
LinkDB
All DBs
Position
10:complement(30101923..30127227)
Genome browser
AA seq
683 aa
AA seq
DB search
MSINQFNGLPHTGHYYELLKKRITLPVWEYKPKFFEMLTNNQIMVLMGETGSGKTTQIPQ
WCVEWLREQGLRKGVACTQPRRMAAMSVAARVAEEMDVTLGQEVGYSIRFEDSSSMKTIL
KYMTDGMLLREAMSDPLFEAYGVVLLDEAHERTLATDILMGVLKQVVSRRKDLKIVVIGA
TLDVGKFQNYFDHAPLMTVPGRTHPVEIFYTPEPEQDYLEASIRTVIQIHRCEEIEGDIL
LFLTDQEEIEEACKRIKRELDTLGPEIGELKCIPLYSTLQPKLQQKIFEPPPPNKPNGAI
GRKVVVSTNIAETSLTIDGVVFVIDPGFVKQKVYDPRIRVESLLVSPVSKASAQQRAGRA
GRTRPGKCFRLYTEKAYKTEMPEQTEPEIVRSNLGTVVLQLKKLGIDDLEHFCFMDPPAP
ETLMRALELLNYLQSLNDEGDITDLGAVMAEFPLDPQLAKMLISSCDFNCSNEILSITAM
LSVPQCFVRPNEAKKAADDAKMRFAHIDGDHLTLLNVYHAFKLNREDPQWCHDNFINYRS
LKSADIVRQQLSKIMDRFSLKKTSTEFSSKDYYINIRKALVAGFFMQVAHLESAGHYLTI
KDNQIVQLHPSTCLDHKPEWVVYNEFDLTTKNYIQTVTDVKPEWLLKIAPLYYDVNSFPS
CEAKRQLEFLINKMSTRNYQEGF
NT seq
2052 nt
NT seq
+upstream
nt +downstream
nt
atgtctataaatcagtttaatggcctacctcacactgggcactactatgagttgcttaaa
aaacgaattactttacctgtgtgggaatataaaccaaaattttttgagatgttgacgaat
aatcaaattatggtacttatgggagaaactggatctgggaaaacaacacagattccacaa
tggtgtgtagaatggctgcgtgaacaaggtttaagaaagggtgtggcgtgtacccaacct
agaagaatggcagcaatgagtgtagctgctagagttgctgaagaaatggatgtcacgcta
ggacaagaagtaggctatagcattcgatttgaagatagttcatctatgaaaacaatattg
aaatacatgactgatggtatgttgctccgtgaagccatgagtgatcctctttttgaagct
tatggagttgtacttcttgacgaagctcatgaacgtacattggctactgatattttaatg
ggtgttttgaaacaggttgtgtctaggcgtaaagatctgaaaatagttgtcattggtgca
actcttgatgttggaaaatttcagaattattttgatcatgcaccattaatgactgttcct
ggaagaacacatcctgttgaaatcttctataccccagagcctgaacaagattatcttgaa
gcctctattcgaactgtaattcaaattcataggtgtgaagaaatagaaggggatatttta
ctatttttaactgaccaagaggaaattgaagaagcgtgcaagagaatcaaaagagaactt
gatacattgggtcctgaaattggagaattgaaatgtattccactgtactccacattacaa
ccaaaattgcaacagaaaatttttgaacctcctcctccaaataaacctaatggtgcaatt
gggaggaaagttgtggtgtcaaccaatatagcagaaacatctttaacaattgatggtgta
gtttttgtgattgatcctggatttgtaaaacaaaaggtgtatgatcctaggatcagagta
gaatctttgttagtatctcctgttagtaaagctagtgctcagcaacgtgctggaagagcc
ggtagaactaggcctgggaaatgctttcgtttatacactgaaaaagcatacaagactgaa
atgccagagcaaaccgaacctgaaatcgtgcgttctaatctcggaactgttgttctgcaa
ttaaagaagcttggcattgatgatttggaacatttctgttttatggaccctcctgctcct
gaaacactaatgagggcattagagctgttgaactacttacaaagcttaaacgatgaggga
gatattacagatctgggagcagtaatggctgagtttccattagatccacaactggctaaa
atgcttatctcatcatgtgactttaactgttccaatgaaattctttcaattactgctatg
ttatcagttccacagtgctttgtgagacccaatgaagcaaagaaagctgcggatgatgct
aagatgagatttgcacatatcgatggagaccacctgactcttctaaatgtttatcacgcc
ttcaagctgaaccgtgaggatcctcaatggtgccacgacaacttcatcaattatcgatcg
ttgaaaagtgctgatattgtccgtcaacaattatctaaaattatggatagattcagtctg
aaaaaaacatctactgaattcagcagcaaagattattacattaatattagaaaagcactg
gttgctggcttcttcatgcaagttgctcaccttgaaagtgctggccattaccttacaatc
aaagataatcaaatagttcagcttcacccatccacttgtctagatcacaaacctgaatgg
gttgtatataatgaattcgacttgacaaccaaaaactacattcaaactgtcacagatgtt
aaaccagaatggttactgaaaatagcacccttgtattatgatgtgaatagcttcccatct
tgtgaggccaagagacagcttgaattccttatcaacaagatgtcaactcgaaattaccaa
gaaggattttaa
DBGET
integrated database retrieval system
