Parasteatoda tepidariorum (common house spider): 107447063
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Entry
107447063 CDS
T06106
Name
(RefSeq) probable helicase with zinc finger domain isoform X1
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107447063
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
107447063
3'-5' decay
Other 3'-5' decay factors
107447063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
ResIII
AAA_19
UvrD-helicase
zf-C2H2_jaz
PhoH
PAM2
AAA_22
MOV-10_Ig-like
AAA_7
AAA_24
Motif
Other DBs
NCBI-GeneID:
107447063
NCBI-ProteinID:
XP_015917359
LinkDB
All DBs
Position
7:69307554..69346525
Genome browser
AA seq
1696 aa
AA seq
DB search
MNEFFHQSMIEFCDYCSVIFNTEAELIAHCNSEAHQLTIMSDEGREWKFRAPPRGVGADQ
YSVCVEFGLRGMCRLNKLCCDAHGDDELSEWKERFDYRQKKLLQAKERRLQGRHYTEQLL
DKWLTAPNPNSIMSEVSDAVEIAFEPELNLTVSEKNCCREWTFHISAKATLRHAALLYET
HRFHFRISQLRARRGSDMKEYNLGPQCQEWNNEDLNAYTDESYTMKVRFLTNIYGTFRQD
IVFDFGFEPVLVKKLCVDVVSLCDMEKLQQARETVVSFTERWSNNDVTIVPFENRPHPLG
DLEKNLLSCYPVPNGKFNVTNSVMEPTLTPDNYCARQHELLCIEEMTQYELLSRYNIQAT
LNLSSCYLLTPNSAVTAKYAHNGELFAHMTLTSVLSEDSASGRLILSNCSTVLLASVKTK
GEEQRKVYEAVIEDKGKTVIYMRLSKKCCEELKLGPDREFLAEVQFQLNRLPVCEMHFAV
DRLHPTSIVFPDISEVPQLWKNKPLNQKLKSFEPKLNPKQREAVLAITTPLCAKLPPVLI
IGPFGTGKTYTLAQAVKIILDDPNSRILVCTHSNSAADIYIREYLHPQVAEGRIEATPLR
IYYRHRWVATVHPTVQQYCLINCDNNEKHFVMPTADDVKAHRIIVTTLKTARYLVQLGLE
KGFFTHILIDEAAQAMECEAIMPLSLADEDTRIVLAGDHMQLCPEVYSPFAQERNLHMSL
LERLYDLYPEQFPCKVLLCENYRSHEAIVQYTSELFYNNHLQASGQQPRHEKFYPLTFFT
ARGEDVQDCNSTAFHNNAEVYELIERVSELKNNWPAEWGIQDESSIGVVTPYYDQVVRIR
AELRKKKMHGVSVERVLNVQGKQFRVIFLSVVRTRQTCGSKAKPESDLDHGFLSNARLLN
TAITRAQSLVCVVGDPVSLCSVGKCRKLWEKFILTCHKETSLFGITWDSLRSQLDSMELK
KNFILNPLAPEFIPGRVYHGFPVTTAATSENFYTNNPPPQPFFVFSALPSPFQGPPLIQP
AVAMVSAPHPYGMLNNVPNCVVPPMIPPAQLNPFQNYPFNSPSLPSPLPQQRPANIPNRI
QTAPFPRKIINQRNPPLLEHPMKDFDHGFGLGRPIKRSEPQVPFQVANKPITRGPEDNNQ
ENFEEMKRHLLNNVDRHVNGFQMKSTELENSVTLQNYPNNYFEKGNKFSKSEEIPNVPLR
NGFCGDELNMGLFADPSRKIQMNGVWAPPKMRSESDLHNNSVNSFEEHHMRMPFNDMNGM
ASEKERFMFEPPNAHMYVPPPPPDKWPNATEPLQSTNSADLPAFNIPMVQTSLLEKLGLL
QKFLPPGTNIPAFLDNDEQIKAYIQNLVVSEGSQAAKAFVVLLLYIKRDQEALQEVYQRK
MRNARFQSPSHNIPETPTPVARNIPCYSSPRPVFNNISRPQESFNNSESLNSEVPFNPFS
MPHIFSLDKLDATFNNSDRNKQEVQKPHSNMGNFVYPWVSENMNGSCQNDPPVYEMSKLS
VRSPVQNKIPNGDLQEDAFSSSAYHNRHFGGEATEENLRHIFGTPDAPPINSFNETNNDS
RGALMCSFPDGGNQQNSYLNRLRNLPPTYNSNNYELDFARIDDGLVSKSSEYSGVMTAGP
LSVSYPDIPDLLSHICPNSKDTSKVIRKPTPRTSESSSSPFVYGINLQPNNDSSLRYPQI
SSEGMTYAKILSSPQQ
NT seq
5091 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaattttttcaccaaagtatgattgaattttgtgattactgtagtgttattttt
aacactgaagctgagctgattgcacattgcaattctgaagctcatcagttgactattatg
agtgatgaaggtagagaatggaaattcagagcaccaccaagaggtgttggagctgaccaa
tactcagtttgtgtggaatttggattgcgtggaatgtgcaggttaaataagctgtgttgt
gatgctcatggtgatgacgaattatctgaatggaaagagcggtttgattacagacaaaaa
aagttgctacaagctaaagaacgacgacttcaaggaaggcactatactgagcaacttctg
gataaatggcttacggcccctaatccaaattctatcatgtcagaagtttcagatgccgta
gaaatagcttttgaaccagaattgaatctaactgtatcagagaaaaattgttgccgagaa
tggactttccatatttctgctaaagcaactttgagacacgcagcattgctttatgaaact
cacaggttccattttagaatatcacaactgagagctcgccgtggatctgacatgaaagaa
tataatttaggccctcagtgtcaggaatggaataatgaagatctaaatgcttatacagat
gaaagttataccatgaaggtacgattccttacaaatatatatggcacatttcgtcaagac
attgtttttgatttcgggtttgaacctgttttggtgaaaaaattatgtgttgatgttgtc
tcactctgtgatatggaaaaactgcaacaagcaagagagacagtggtctcttttactgag
cgttggagtaacaatgatgtcaccattgtaccttttgaaaatcgtccacatcccttgggt
gatctggaaaaaaatcttctttcttgttatcctgttcctaatggaaaatttaacgtcacc
aattccgttatggaacctactttaacacctgataactactgtgcacgtcaacatgaatta
ctctgtattgaagaaatgactcagtatgaacttctttcacggtataacattcaagcaact
ttaaatctatcaagttgctatcttctaactccaaattctgcagtgactgcaaaatatgct
cataatggagagctttttgcacatatgaccttgacatctgttttatctgaagactctgca
tcaggaagattaattcttagtaactgtagtacagtccttctagcatctgttaaaacaaaa
ggagaggaacagaggaaagtttatgaagcagtaattgaagataaaggaaaaacagttatt
tatatgagattgtctaagaagtgttgtgaggagttaaaactaggtcctgatcgagagttt
ttggctgaggtgcaatttcaactaaaccgtctaccagtgtgtgaaatgcattttgctgtt
gatagattgcacccaacatcaattgtatttccagatatatcggaggttccacaattatgg
aaaaacaaacctttaaatcagaaacttaaatcatttgaacctaagctcaatccaaaacaa
agagaagctgttttagcaattactactcctctctgtgccaaattaccacctgttttgatt
attgggccgttcggaacaggaaagacatataccttagcacaagcagtaaaaattatttta
gatgatcctaactctagaatattagtttgcactcattcaaatagtgccgctgatatttac
ataagagaatatttacatccacaagttgctgagggtagaattgaagctacacccttgcgt
atatattaccgccatcgctgggtagcgactgtacatccgacagttcaacagtactgttta
atcaactgtgataacaatgaaaagcattttgtcatgccaaccgctgatgatgttaaagct
catagaattattgtcactactttaaaaactgcaagatacctagtacagcttggcctagaa
aaagggttctttactcacatacttattgatgaagccgctcaagcaatggaatgtgaagct
ataatgcctttgtcactggctgatgaagataccagaattgtccttgctggagatcatatg
cagctttgccctgaagtgtattcaccttttgcgcaagagcgcaatcttcacatgtcactc
ttagagaggctatatgacttgtatcctgaacaatttccatgtaaagtgcttctttgtgaa
aattacagatctcatgaggcaatagtacagtatacatctgagcttttttataataaccat
ctgcaggctagtggtcagcagccaaggcatgagaagttttatcctttgactttttttact
gctagaggagaagatgttcaagattgtaacagtactgcatttcataataacgcagaggta
tatgaacttattgagcgggtaagtgaacttaaaaacaactggcctgctgaatggggtatt
caagatgagtctagtattggtgttgtgactccttattatgaccaggttgttagaattaga
gctgaattaagaaaaaagaagatgcatggtgtgtctgtagaacgagtactgaatgttcaa
ggaaaacagtttagagtcatatttctaagtgtagtccgaacacgtcaaacttgtggatca
aaagcaaaaccagagtccgatttagatcatggttttttatcgaatgctcgactactcaac
actgccattacaagagctcaatcacttgtgtgtgttgttggtgatcctgtgtctttatgt
tctgttggaaaatgcaggaaattgtgggaaaaattcatacttacttgtcataaagaaacc
agtctctttggaataacgtgggactctttacgatcacaattagatagcatggagttgaag
aaaaatttcattttaaatcccctggcaccagaattcattcctggtcgagtttaccatgga
ttccctgttactactgctgccaccagtgagaacttttacactaacaatccacctcctcaa
cctttttttgttttttctgctctaccctctccatttcagggccctcctctaatacaacct
gctgttgctatggtatcggcacctcatccttatggtatgctaaataatgttccaaactgt
gttgtacctcctatgattcctcctgcacaattaaatccttttcaaaattatccttttaat
tcaccatctttaccttctcctttgccacaacaacgccctgcaaatattccgaatcgtatt
caaacggctcccttcccacgaaagataatcaatcaaagaaatccgccattgttagaacat
cctatgaaggactttgaccatggttttggtttaggaagacccatcaaaagaagtgagcct
caagtcccgttccaagtggctaataagccaataaccagaggtccagaagataataatcaa
gaaaattttgaagaaatgaagcgtcaccttttaaataatgttgaccgccatgtcaatggc
ttccaaatgaaatccaccgaactggaaaattcggtcactttacaaaattaccccaacaat
tattttgagaaaggaaataaattttcaaagtctgaagaaattcctaatgttcctttaaga
aatggtttttgtggagatgaattaaacatgggtttatttgctgatccttcacgaaaaatt
caaatgaatggtgtatgggctcctcccaagatgcgttcagaatctgatttgcacaacaac
tcggtcaattcatttgaggaacatcatatgaggatgccgttcaatgacatgaatggtatg
gccagtgaaaaagagcgtttcatgttcgagcctccaaatgcacacatgtatgtgccccct
ccgccaccagataaatggcccaatgctactgagcctctccaaagcacaaattcagctgat
cttcctgctttcaatatacctatggtccaaacatctcttcttgaaaaattaggacttttg
cagaaatttttgcctcctggaacaaacattccagcgtttttagataatgatgagcagata
aaagcttatatacagaatttggtggtttctgagggttctcaagctgcaaaagcttttgta
gttttgcttctatacattaaaagagaccaagaagctcttcaagaggtataccagagaaaa
atgagaaatgcccggttccagtcaccttctcataatattccagaaacaccaactcctgtt
gctagaaatattccctgttattcatcaccaagaccagtattcaataatatatctaggcca
caagaaagtttcaataattctgaatcattaaattcagaagttccttttaaccctttctca
atgcctcatatattttccctagataagttagatgcaaccttcaacaatagtgacagaaat
aaacaggaagttcaaaaacctcattcaaatatgggcaattttgtttatccttgggtgtct
gaaaatatgaatggaagctgccaaaatgatccaccagtttatgagatgtcaaaattatct
gtgaggagtccggttcaaaataaaattcccaatggggatttacaagaggatgcattttct
tcaagtgcataccacaataggcattttggaggagaagctacagaagaaaatttgcggcat
atttttggtacaccagatgcaccaccaataaattctttcaatgaaacaaataatgattca
aggggggctctgatgtgttcttttcctgatggtggaaatcagcaaaattcatatttaaat
cgtctccgaaatctaccaccaacttacaattccaacaattatgaattagattttgcaaga
atagatgatgggttggtttctaaaagttcagaatactcaggtgtgatgacagctggtccg
ttatctgtatcctacccagatattcctgatcttctctctcatatttgtcccaatagtaaa
gatacatccaaagttattcgaaaacccacccctagaacatctgaaagctcttctagtcct
tttgtctatggcatcaatttacaacctaataatgattcgtcattgcgttatccacaaata
tcttcagaaggtatgacatacgctaaaatattgagttcccctcaacaatga
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