Parasteatoda tepidariorum (common house spider): 107447099
Help
Entry
107447099 CDS
T06106
Name
(RefSeq) structural maintenance of chromosomes protein 5
KO
K22803
structural maintenance of chromosomes protein 5
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptep03400
]
107447099
DNA repair and recombination proteins [BR:
ptep03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
107447099
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_29
CENP-F_leu_zip
AAA_27
AAA_25
APC_N_CC
Motif
Other DBs
NCBI-GeneID:
107447099
NCBI-ProteinID:
XP_071035184
LinkDB
All DBs
Position
1:40226954..40288159
Genome browser
AA seq
1080 aa
AA seq
DB search
MAGYRGGHILRIKLKNFMTYDELELFPKHGLNLVVGVNGSGKSSIMCAICLGLAGKPQFT
GRSAQLSEYIKYGCDKATIEIELDNLSKRNIVITRIIQADKSLWYLDKKPVSYSEIQNTV
KKFHIDVSNLCQFLPQEKVAEFAKMDKKSRLENMLQAIGEPHLYQLFKDLKQMKVDSVKL
EEEINLHKNHKSVEDQKNERIKVDVEKQEERTILKETLRTLKQHKMYLDYQEIRKMSSDL
KKKIKPKEEEINTAKLDIEKINNYCQEKNSIIRENFEQIKNAKRTSSVIQEKIVEYEAKL
SEFQDMGCNAKIRYQKRIEEKRNQVQKLAEIKQQKLALERLVQKSRSECPELKEENIKLT
AELEDYKTHISKLNSTFAFINVERNKLEYGIKNNLNEIESLRNEDNKRLEFLKQRFKDAY
EGVIWLQQNYNRFRAKVHPPILTLLKIENEDNCKYIENLISQRDLVAFVCEDKEDNKLLT
QILRVQKKLNVNIVMAPDKPLDCYRAPPLTKQFRQMGILCFLREIISAPDAVMRFLCECY
KLHMIPICNHTAEEKEKNMRDILQNFRSFFTANARYSGKYSKYGNKNFSMRRDPIQRKRI
IPSSRDHSDQLQELLAKSQAMKSEFESYTSELKKLHEDRKTREREENDLREKKRAVVEKL
REHHTYERQLVQKTETYERKKDEIINEEDEKIILMKKIQEINSKKCFILKKFNELLVDFI
KCKKKRLTSNLKAKLLEKSIFTFQRQLKEKKEQLAVDERNLEKLKQHRAAIVEKGFAFHN
EIKGFLQELQAILNKNVKSDTLLTNKLLSCSDDSVSLQCNKFGNLDECSIPSLPKPLMKK
LLNNYGCKTKEETEREISRIQAQLEITSEENEAVLHEYTQRKKRIAEIETNIETFHTKLR
ELKADIDKKRNEWLPSLSKYIRNINRKFSQYYKQLKCAGEISLDTCNDSDDFPKYGLQIT
LKYRDNEPFMELSSTHHSGGECSVAAIIFILSLQELTEVPFRCIDEINQGMDAQNERSMY
NLISDSAKSGSCSQYFLLTPKLLTGLDMLEHEDVTVHIIFNSTFLEVDMSVQQHIELLDT
NT seq
3243 nt
NT seq
+upstream
nt +downstream
nt
atggctggatatcgaggaggtcacatacttaggataaaactaaaaaatttcatgacctat
gatgaattagaattatttcctaaacatggacttaatctggttgttggtgtaaatggaagc
ggcaagtcatctataatgtgtgcgatttgcttaggccttgcagggaaacctcaattcact
ggtcgatctgctcaattgtcagaatacataaaatatggctgtgataaagctactatagaa
attgaactagataacctttctaaaaggaatatagttattactcgaatcattcaagcagat
aaatcattatggtatttggacaaaaaacctgtttcttacagtgagatacagaatactgtc
aaaaagttccatattgacgttagtaacttgtgccaatttttgccccaggaaaaggtagca
gaatttgccaaaatggacaagaaatcaaggcttgaaaatatgctacaagctattggagaa
cctcatttatatcagctttttaaagacttaaaacaaatgaaagtggactctgtgaaatta
gaagaagaaatcaatttacataaaaatcacaaaagtgtagaagatcaaaaaaatgaacga
ataaaagtggatgttgaaaaacaggaagaaagaacaatactaaaagaaactctaagaact
ttgaaacagcataaaatgtatttggactatcaagaaatacggaaaatgtcatctgatcta
aaaaaaaaaattaagccaaaagaagaagaaattaacacagcaaaactggatattgaaaaa
ataaataattattgtcaagaaaaaaattctattatccgagaaaactttgagcagattaaa
aatgcgaaaaggacatcatctgttattcaagaaaaaattgtagaatatgaagctaaacta
tctgaatttcaagatatgggttgcaatgccaaaatacgttatcaaaaaagaattgaagaa
aaaagaaatcaagtacaaaaattagctgaaattaaacaacaaaagcttgctttagaaagg
ctagttcaaaaaagtagatcggaatgtccggaactgaaggaagaaaacataaaattgaca
gcagaattagaagactataaaactcacatctcaaaacttaactcaacatttgcttttata
aatgtggagagaaataaattggaatatggtattaaaaataatttaaacgaaattgaatct
ttgagaaatgaagataataaaagattagaatttttgaagcagaggttcaaggatgcatat
gaaggagttatatggttacaacaaaattataatagatttagagctaaagttcatccacca
atactgactttgctaaagatagaaaatgaagataactgtaaatatatagaaaatttaatc
agtcaaagagacttagttgcctttgtctgtgaagataaggaagacaacaagcttttaacg
cagatattgagagtgcaaaagaagctcaatgtcaatatagtgatggctccagacaagcct
ttggattgctatagagctccacccctgacaaagcaattcaggcaaatgggtattttatgc
tttttgagggaaataatatctgctcctgatgctgttatgcgtttcttgtgtgaatgttat
aaattacatatgatacctatttgtaatcacactgctgaagaaaaagaaaaaaatatgcga
gatatacttcagaattttaggtctttttttacagctaatgcgaggtattctgggaaatat
tcaaaatatggcaataaaaatttcagcatgagaagagatccaatacagcgcaagaggatt
attccaagttccagagaccactctgatcaactacaagagcttttagctaaatcccaggct
atgaaatctgagtttgaaagttatacgtccgaacttaaaaagttacatgaagataggaaa
acacgtgaaagagaagaaaatgatcttcgagaaaaaaaaagagctgttgttgagaaattg
agagaacatcatacatatgaacgtcaacttgtacaaaaaacagagacttatgaaagaaag
aaagatgaaatcataaatgaagaagatgagaaaataattctcatgaaaaaaattcaagaa
ataaactctaaaaaatgtttcattctgaagaaatttaatgaattattagtggacttcata
aagtgtaaaaagaagagactgactagtaatttgaaggcaaagttgcttgaaaaaagtata
ttcacttttcaacgacaattgaaagaaaaaaaagaacaactcgcagtggatgagagaaat
ctggaaaaattaaaacaacatagagcagccattgtagaaaagggatttgcttttcataat
gaaattaaaggattcttacaagaactacaagctattctaaacaagaatgtaaagtctgat
actcttctcacgaataaactgttatcctgttctgatgattctgtgtccctgcaatgtaat
aaatttggaaatctagatgaatgttctattcccagtttaccaaagcctttaatgaagaaa
ttattaaataattatggctgtaaaactaaagaagaaactgaaagagaaatcagccgtatt
caagcacaactggaaataacttctgaagagaatgaagcagttctacatgaatacacacaa
cgaaaaaagagaattgcagaaatagagacaaatattgaaacatttcacaccaagttgagg
gaactgaaagcagatatagataaaaagaggaatgaatggctgccttctttatcaaaatac
atcagaaatattaatagaaagttcagtcaatattacaaacaactcaaatgtgcaggcgaa
ataagtttagatacatgcaatgattcggatgattttcccaagtatggtcttcaaataaca
ctgaaataccgagacaatgagccatttatggaattgtccagcactcatcatagtggtgga
gagtgcagtgttgctgctattatcttcattctttctttgcaagaactcacagaagtgcct
tttagatgtattgatgaaattaatcaggggatggatgctcaaaatgaaagaagtatgtac
aatttaatttcagatagtgcaaaaagtggatcctgctctcaatattttctgcttactcct
aagttattgacaggtctggatatgcttgagcatgaagatgttactgttcacatcattttt
aactcaacctttttagaagtagatatgagtgtccaacaacatattgaactgttagatacc
tga
DBGET
integrated database retrieval system
