Parasteatoda tepidariorum (common house spider): 107447890
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Entry
107447890 CDS
T06106
Name
(RefSeq) replication factor C subunit 1
KO
K10754
replication factor C subunit 1
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03030
DNA replication
ptep03410
Base excision repair
ptep03420
Nucleotide excision repair
ptep03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
107447890
03410 Base excision repair
107447890
03420 Nucleotide excision repair
107447890
03430 Mismatch repair
107447890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ptep03032
]
107447890
03400 DNA repair and recombination proteins [BR:
ptep03400
]
107447890
DNA replication proteins [BR:
ptep03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
107447890
DNA repair and recombination proteins [BR:
ptep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
107447890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
AAA
BRCT
AAA_22
Rad17
BRCT_2
AAA_30
AAA_16
AAA_14
AAA_5
RuvB_N
nSTAND3
AAA_18
AAA_33
Sigma54_activ_2
PTCB-BRCT
AAA_17
RNA_helicase
AAA_7
NB-ARC
AAA_19
Motif
Other DBs
NCBI-GeneID:
107447890
NCBI-ProteinID:
XP_042895536
LinkDB
All DBs
Position
2:complement(58471902..58507692)
Genome browser
AA seq
982 aa
AA seq
DB search
MDIRKWLVSSKPKDSSSNTGNKKDRPKKAEDSPSSSGNAKHSKKRRIIESDSDEEPIPQK
EKASNKNKSPKARENGKNSSKPPKASFKEVTASDFFGSESVSTTNKKTKSPKKKTNDISL
HEDEEFEATLKQLNNVKPIKKDSQEKKKPDPVSAKKDNKKGNSLPTKRKANSVTSPKVEI
IPNPKAPPKKKIIIDSKDEKPAAKKPRNSGAANYASYLNREGPKALGSKEIPEGAEGCLA
GLTFIITGVLESIERDEGKALVEKYGGKVMTTITKNTKYIIIGRDAGASKLEKAEKFGTI
QLDEDGLLDLIRTRPGKDGVVASKSVKKEKLEKASASSTENSDVPKDSLEASFLEDDDDM
DLFDESPLIETKEAVNKIVKKDNSVEELPEPKKKNVVPEKKEIDADMKNTIVKSDSPLSL
SMWVDKYKPSNIKQVIGQQGDKSNAKKLLHWLVNWRKNRRLNKKAIPGRFNANDDGSGFK
AALLSGPPGVGKTTTAQLVCKESGYDFFELNASDTRSKKTLQQMVSQLLGNQTLADCFKD
DAGKVSSNHVIIMDEVDGMAGNEDRGGMMELIGFIKASKVPIICICNDRNHTKIRSLSNH
CFDLRFQRPRVEQIKAAMMSIAFKEHIKVSPEALQDVIVASNQDVRQVLHNMSMWSAKSK
GLTSEQTKADIGRGTKHIKMGPFDVLREVFAIGNNPKATIMDKSDLFFHDYSLSPLFVQE
NYVHVIPTEAQGNKKKHLRLLSAAADSICIGDMIDRQIRNQNSWSLLPTQAIFASVVPGE
LLKGHLKQMINFPAWLGKNSNHKHMDRVLQELHVHMRMRITGNKTDVALEYLPLLKRALT
KPLIERESEGIPDVLKIMENYFLLREDFDSIIDLSLWPNQTDPRTKIITKVKSAFTRAYN
KESGKNPYAITNVKKKKGASKDVEDGLDEDNDVVSEEEEDEDIEKDAMIKVKKPTKKSAA
DSSEPSTSKDKKKNPSKRGKAK
NT seq
2949 nt
NT seq
+upstream
nt +downstream
nt
atggatattagaaagtggttagtttcttctaagccaaaggattcttcatcaaatactgga
aacaagaaagatcgaccaaagaaggctgaagattctccttcgtcatcaggaaatgctaaa
cattctaaaaagcggcgaataattgaatcagactcagatgaagaacctattcctcaaaaa
gaaaaagcaagtaataaaaataaaagtcccaaagctagagaaaatggtaaaaatagttct
aagcctccaaaagcatcattcaaagaagttacggcttcagacttttttggttctgaatca
gtttcaaccaccaacaagaagactaaatctcctaaaaagaaaacaaatgatattagtctt
cacgaagatgaagaatttgaagcaaccctcaagcagttgaataatgtaaaaccaataaag
aaagattcacaagaaaaaaagaagcctgatcctgtttctgccaaaaaagacaataaaaaa
ggaaattccttgcccaccaaaagaaaggccaactctgttacttcccctaaagtggaaatt
atccctaatcctaaagctcctcctaaaaaaaagataattattgatagtaaggatgaaaaa
ccagctgctaaaaaacctagaaatagtggtgctgctaattatgcaagttatcttaaccgt
gaaggtcctaaagcgctgggatctaaagaaattcccgagggagctgaaggttgtcttgct
ggattaactttcattattactggtgtattagagtcaattgaacgtgatgaaggaaaagct
cttgttgaaaagtatggaggaaaagttatgacaactattaccaaaaatacgaaatacatt
ataataggtagagatgctggggctagcaaactagaaaaggcagaaaaatttggtacgata
cagcttgatgaagatggacttcttgatttaattcgaactcgtcctggaaaagatggagtg
gttgcatcaaaatctgttaaaaaagaaaaattagaaaaagccagcgcatcatcaactgaa
aattctgatgtgcctaaagattcattagaggcatcattccttgaagatgatgacgatatg
gatttatttgatgagtcaccacttattgaaaccaaagaggctgtaaataaaattgtgaaa
aaagacaattctgtggaagaacttcctgaacccaagaaaaaaaatgtagtaccagaaaaa
aaggaaattgatgctgatatgaaaaacacaatagtaaaatctgatagtcctttatcttta
tcaatgtgggtagataaatacaagccttctaacattaagcaggtaataggtcagcaagga
gataaaagcaatgctaagaaactcttgcattggttagtcaattggagaaaaaataggaga
ttaaacaaaaaagcaataccaggccgtttcaatgctaatgatgatggctctggtttcaaa
gctgcactgctctctggtcctcctggtgtgggcaaaacaacaacagctcagttggtgtgc
aaagaatctggttatgatttctttgaactcaatgcttcggatactcgatcaaagaaaacc
ttgcagcaaatggtttctcagttgttaggcaatcaaactttggcggattgttttaaagat
gatgctggtaaagtttcaagcaatcatgtaattattatggatgaagtcgatgggatggct
ggaaatgaagatagaggcggaatgatggaactgattggtttcattaaagcatctaaagtt
cctattatttgtatctgcaatgacagaaatcatacgaaaatcaggtcgctaagtaaccat
tgttttgatttaagattccaaaggccaagggttgagcaaatcaaggctgccatgatgtca
atagcttttaaagaacatataaaagtatctcctgaagctcttcaagatgttatagtggct
tcaaatcaagatgtgcgccaggtcctacacaatatgtcaatgtggagtgcaaaatcgaaa
ggtttaacttctgaacaaacaaaagcagatattgggcgtggaacgaaacacataaaaatg
ggcccttttgatgtattaagagaagtttttgcaattggcaacaatccaaaggctactatt
atggataaatcagatttattcttccatgattattctttgtctccattatttgtacaagaa
aattatgtccatgtcattcctactgaagctcagggtaataagaaaaagcatcttaggtta
ctcagtgctgctgctgacagcatatgcataggagacatgattgatcgccaaattagaaat
cagaatagttggtcactcctacccactcaggcaatatttgctagtgttgttcctggtgaa
ttgcttaagggacatttaaagcaaatgattaattttccagcatggctggggaagaattct
aatcataagcatatggacagagttttgcaagaacttcatgtgcatatgcgaatgagaata
actggtaataaaacagatgttgctttagaatatctacctcttctaaagcgcgcattgacc
aagccgttgatagaaagagaatctgaaggtattcctgatgttttaaaaattatggaaaat
tactttctcttaagagaagattttgacagcattattgatttatctctttggcctaaccaa
actgacccaagaacaaaaataatcacaaaggtgaagagtgcatttactagagcctacaat
aaagaaagtggtaaaaatccatacgctatcactaatgtcaaaaagaagaagggagcttcc
aaagatgttgaggatggacttgatgaggataacgatgtggtgtctgaggaagaggaagac
gaggacattgagaaagatgcaatgattaaagtgaaaaaacctaccaaaaaatctgcagca
gacagcagtgaaccatcaacatctaaggataaaaagaagaatccctcgaagagaggaaaa
gccaaatga
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