Parasteatoda tepidariorum (common house spider): 107449618
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Entry
107449618 CDS
T06106
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03020
RNA polymerase
ptep03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107449618
09124 Replication and repair
03420 Nucleotide excision repair
107449618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptep03021
]
107449618
03400 DNA repair and recombination proteins [BR:
ptep03400
]
107449618
Enzymes [BR:
ptep01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107449618
Transcription machinery [BR:
ptep03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
107449618
DNA repair and recombination proteins [BR:
ptep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
107449618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_3
RNA_pol_Rpb2_5
DUF5817
Motif
Other DBs
NCBI-GeneID:
107449618
NCBI-ProteinID:
XP_015920686
LinkDB
All DBs
Position
2:complement(29178071..29202132)
Genome browser
AA seq
1175 aa
AA seq
DB search
MYEAEDENFDEDESEEITADLWQEACWIVISAYFDEKGLVRQQLDSFDEFIQMSVQRIVE
DTPQIDLQAEAQHTSGEVETPPRYLVKFEQIYLSKPTHWEKDGAPSPMMPNEARLRNLTY
SAPLYVDITKTVIKEGEEPVETQLQKSFIGKIPIMLRSTYCLLNGLTDRDLTELNECPLD
PGGYFIINGSEKVLIAQEKMATNSVYVFQMKDSKYAYKSECRSCLEHSSRPTSTLWVNML
ARGGQGVRKSAIGQRIIAILPYIKQEIPIMIVFRALGFVADRDILEHIIYDFEDQEMMEM
VKPSLDEAFVIQEQNVALNFIGSRGARPGVTKEKRIKYAREILQKEMLPHVGVSDFCETK
KAYYLGYMVHRLLLAALGRRELDDRDHYGNKRLDLAGPLLAFLFRGLFRTLTKEVRMYAQ
KFIDRGKDFNLELAIKTRIITDGLRYSLATGNWGDQKKAHQARAGVSQVLNRLTFASTLS
HLRRVNSPIGRDGKLAKPRQLHNTLWGMICPAETPEGHAVGLVKNLALMAYISVGSQPSP
ILEFLEEWSMENLEEIAPSAIAEATKIFVNGCWVGIHRDPDQLMNTLRKLRRQMDIIVSE
VSMVRDIRDREIRIYTDAGRICRPLLIVENQKLLLKKRHVDRLKEREYNNYSWQDLVANG
VVEYIDTLEEETVMLAMTPDDLLEDKGQAYCSTYTHCEIHPSMILGVCASIIPFPDHNQS
PRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSI
VAIMSYTGYNQEDSIILNASAIDRGFFRSVFYRAYKDAEQKQIGDQEEQFEKPTRETCQG
MRNAIYDKLDDDGIIAPGTRVSGDDVIIGKTITLPENDDELESTTRRFVKRDASTFLRNS
ETGIVDQVMLTLNSDGYKFCKIRVRSVRVPQIGDKFASRHGQKGTCGITYRQEDMPFTAE
GLTPDIIINPHAIPSRMTIGHLIECLQGKVSSNKGEIGDATPFNDTVNVQKISNLLQEYG
YHLRGNEVMYNGHTGRKVNAQIFLGPTYYQRLKHMVDDKIHSRARGPVQILVRQPMEGRA
RDGGLRFGEMERDCQIAHGAAQFLRERLFEVSDPYRVHVCNLCGLLAIANLKNNTFECRG
CRNKTQISQVTIPYACKLLFQELMSMSIAPRMMVI
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggctgaagatgaaaactttgatgaagatgagtcagaagaaataactgccgat
ttatggcaggaagcctgctggattgtgatcagtgcctattttgatgagaaaggtctggtg
cgtcaacagctggactcctttgatgagttcatccaaatgtctgtgcagaggattgtcgag
gacacccctcagatagatttgcaagctgaagcgcaacatacaagtggagaagtagaaact
ccacctcgatacttggttaaatttgaacagatctatttatccaaaccaacacattgggag
aaggatggtgctcctagtcctatgatgcccaatgaagctaggctgagaaatttgacttat
tctgctccactttatgtggatatcacaaagactgtcattaaagaaggtgaggagccagta
gaaactcaacttcaaaagagctttattggaaaaattcctatcatgttaagatctacctac
tgtcttttaaatggcctcaccgatagagatttgacagagttgaatgagtgtcctttagat
cctggtggctatttcataattaatggatcagaaaaggttttgattgcacaagaaaaaatg
gcaaccaactctgtgtacgtctttcaaatgaaggattctaagtacgcctataaatcagaa
tgccggtcttgtttagagcactcgtctcgtcccaccagcacattatgggtaaacatgctt
gccagaggggggcagggtgtgcgtaagagcgctattggacagagaataattgctatattg
ccatacattaagcaagaaatccccatcatgattgtgttcagagctttgggatttgtagct
gatcgagacattctggagcatattatctatgactttgaagatcaggaaatgatggaaatg
gttaaaccatctttggatgaagcttttgtcattcaagaacagaatgtggcactgaacttt
ataggttctcgtggtgctcgtccaggtgtcacaaaggaaaagcgtattaagtatgcaaga
gaaattttgcagaaggaaatgttacctcatgttggagtcagtgatttctgtgagactaag
aaagcttattacttaggttacatggttcaccgattgttgttggctgccctgggaaggaga
gagttggatgacagagatcactacggtaataagagattggacttggcaggtccccttcta
gctttcctcttcagaggcttatttaggactttaacaaaagaagtcaggatgtatgcccag
aagttcattgatcgtgggaaagatttcaacctggagttggccatcaagacaagaatcatc
acagatgggctgaggtactctttagccactggaaactggggagatcaaaagaaggctcat
caagcaagagctggtgtctcacaggtgttaaacaggttgacttttgcttcaacactttct
catctaaggcgtgtcaattcacccattggccgtgatggtaaactagccaagccacggcag
cttcacaatactctttggggtatgatatgtcctgctgaaactccagaagggcatgctgta
ggcttagtgaaaaacttggctcttatggcctacatttcagttggatcccagccatctccg
attctagagtttttagaggaatggagtatggagaatttggaggaaattgcaccttctgct
attgctgaagccacaaaaatatttgtaaatggctgttgggtaggcattcacagagatcct
gatcaactgatgaacactttgcgtaaacttcgtaggcagatggatatcattgtgtctgaa
gtatccatggtaagagatattagagacagagaaattcgtatttatacagatgcaggacga
atttgtcgcccactacttattgtggagaatcaaaaacttttgctgaagaaaagacatgtg
gatcgcctgaaagagcgtgaatacaacaattacagttggcaagatcttgtagcaaatggt
gttgttgagtacatcgacaccttagaagaagaaactgtaatgttggccatgacacccgac
gatcttcttgaagacaaaggccaggcctattgttcaacttacacgcattgtgaaatccac
ccttctatgattttaggagtctgtgcttctatcattccatttccagatcacaatcagtct
cctcgtaatacttatcagtctgctatgggtaagcaagctatgggtgtctacatcacaaat
ttccatgttcgaatggatacactggctcatgtactgtattatcctcagaagcctcttgtg
acaacaagatctatggagtatcttaggtttagagaattgcctgctggaattaactccatt
gttgccatcatgtcctatactggctacaaccaagaggattctatcattttaaatgcctct
gccattgacagaggattctttagatctgtattttatcgtgcttacaaagatgctgaacaa
aagcagattggagatcaagaggaacaatttgaaaagccaacaagagaaacatgccaaggt
atgcgtaatgctatttatgataaattggatgatgatggcattatcgctcccggtaccagg
gtttccggagacgatgtcattattgggaaaaccattacactgcctgaaaatgatgatgag
ctggagagcactactcgcaggtttgtgaaaagagatgccagcacgttcttgcggaacagt
gaaactggaattgtcgaccaagtcatgctgaccctcaactctgatggttataaattttgt
aagatcagagtgcgttctgtgcgtgtaccccagattggtgacaagtttgcatccaggcat
ggtcaaaaaggaacttgtggtataacataccgtcaagaggatatgccatttactgctgaa
ggattgacgcctgacattatcatcaacccccacgccattccatctcgtatgactattggt
catttaattgagtgcctccaaggaaaagtttcatcaaacaaaggagaaattggagatgct
acacctttcaatgatactgtcaatgtgcaaaagatatccaatcttcttcaagaatatggg
tatcatctgcgtggaaatgaggtaatgtacaatggccacacaggcagaaaagtgaatgcc
cagatctttttaggccccacctactaccaaagattaaagcatatggtggatgacaaaatt
cattcaagagcaagaggtcctgtccaaattttggttaggcagcctatggaaggaagggca
agagatggaggtttgcgttttggagaaatggaacgtgattgtcaaatagctcatggtgct
gctcagttcttaagagaaaggttatttgaagtctctgatccatatagagttcacgtatgc
aatttatgtggtcttttagccattgcaaatctgaaaaacaacacttttgaatgccgagga
tgcagaaataagacacagatatctcaagtaactataccatacgcttgcaagttactcttt
caagagcttatgtcgatgtccatagcacctcgaatgatggtgatctaa
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integrated database retrieval system
