KEGG   Parasteatoda tepidariorum (common house spider): 107449795
Entry
107449795         CDS       T06106                                 
Name
(RefSeq) superkiller complex protein 8
  KO
K12602  WD repeat-containing protein 61
Organism
ptep  Parasteatoda tepidariorum (common house spider)
Pathway
ptep03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:ptep00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    107449795
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ptep03019]
    107449795
Messenger RNA biogenesis [BR:ptep03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     107449795
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR3_2nd WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz EIF3I Beta-prop_WDR36-Utp21_2nd WDR55 WD40_Gbeta WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR90_POC16_2nd ANAPC4_WD40 Beta-prop_WDR36-Utp21_1st WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_EML Beta-prop_Aladin DSE1_N WDR90_beta-prop_4th Beta-prop_DCAF4 Beta-prop_VPS8 Beta-prop_Vps41 Beta-prop_ACSF4 Beta-prop_NOL10_N Beta-prop_WDR19_1st Beta-prop_NWD2_C Beta-prop_RIG_2nd WD40_RFWD3 NBCH_WD40 CFAP251_N Tricorn_2nd Beta-prop_SCAP Beta-prop_WDR41 Beta-prop_Nup120_160 Beta-prop_NUP159_NUP214 Beta-prop_WDR35_TULP_N Beta-prop_HPS5 Beta-prop_SPT8 ASA1 Beta-prop_EIPR1 PROPPIN TRM82_WD PD40 WD40_like Beta-prop_IFT140_1st Ge1_WD40 DUF7165 PAC11 WDR54 Beta-prop_DCAF12 Beta-prop_pof12 DUF8135
Other DBs
NCBI-GeneID: 107449795
NCBI-ProteinID: XP_015920940
LinkDB
Position
9:complement(57794428..57811487)
AA seq 301 aa
MYSVIFKQEQAHDDSIWCCAWKKGKQDNLNHIVTGGVDDVVKSWKWDEEKLDLRHIFEGH
ALGVVSVDINDDGSIAASSSLDSQIRVWELHSGQELKSIDAGPVDAWTVTFSPDSKYIAT
GSHGGKINLYGVETGKLESFLETKKFTLSVAFSPDGKYLASGAIDGIIKVFDIAAGKLVH
TLEGHAMPIRSLTFSKDSSMLITASDDCHIKIYNVQHAHLIGTLSGHGSWVLQVDCSPNN
THFVSSSSDKTVKVWEIASKECIHTFNEHSDQVWCAKYNHNGSKIVSVSDDRTINIYDCP
V
NT seq 906 nt   +upstreamnt  +downstreamnt
atgtattctgtgatattcaagcaagaacaggctcatgatgatagcatatggtgttgtgct
tggaaaaaaggaaagcaagataacttaaatcatattgttacaggaggagttgatgatgtg
gtcaaatcttggaaatgggatgaagaaaaattagatcttcgtcatatatttgaaggccat
gctttaggagttgtttcagttgatatcaatgatgatggttcaattgctgcatctagttct
ttagatagtcagattagggtatgggagttacattctggtcaagaattgaagagtattgat
gctggtccagttgatgcttggactgttacattttctcctgattccaaatacattgccaca
ggcagccatggaggcaaaataaatttgtatggtgtagaaactggaaaacttgaatctttt
ttagaaactaaaaaattcactttgagtgtagcttttagtcctgatggtaaatatcttgcc
agtggtgctattgatggaataattaaagtgtttgatatagctgctggaaagcttgtccac
acattagaaggtcatgctatgccaattcgttctttaacattttccaaagattcttcgatg
cttataactgcttctgatgattgtcacattaaaatttataatgtacaacatgcacattta
ataggtactttatctggacatggatcatgggttcttcaagttgattgttctccaaataat
acacattttgtttcaagttcatctgacaaaactgtaaaagtttgggaaatagcctccaaa
gagtgtattcatacttttaatgaacattctgaccaagtgtggtgtgcaaaatataatcac
aatggaagcaagatcgtgtctgtttcggatgaccggactattaacatttatgactgccca
gtgtaa

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