Parasteatoda tepidariorum (common house spider): 107450718
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Entry
107450718 CDS
T06106
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03013
Nucleocytoplasmic transport
ptep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107450718
03015 mRNA surveillance pathway
107450718
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107450718
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
107450718
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
107450718
NCBI-ProteinID:
XP_015922072
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All DBs
Position
5:complement(74699187..74722954)
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AA seq
777 aa
AA seq
DB search
MAELLRRRRQKSDDDSEKSFSESDLEVEDLNDSAISSKDTPEKAVPLKTADGSEYESAEE
EEKILEKPITLDPLTEPCAEPSEHLSGTSDNEETSPKEQESLSELVDEEGGEEGIAETED
VEGEFLNGDDAPENGSEDEEFVEEERQQGDGEECSPASVAAEKELDFDEDRRNPQYIPKK
GMFYEHDDRGNSEDVKEKPEEPPRDRKKKLWLDEGKWGHDRFREEEQFPKSRNELIDTYG
YDIRNEDGPPRARRRRRYGRGPTKYDRNWEDVTAYGREKFKISPRGSPRGQRGVGRFSRG
GNPRFRGRGQRALNFSGPRNEDEEEGLNTNTAENFVNNENGEAEVKDVDVPPVINREDFP
ALPTKNNEPEVEEPPLNSFSKSPPKIIEAQSVRTLTFENSSYGGRNSIERNSVERDVPPR
RGKTPPFINNHERGNRRPNPRGHRGSGRGDYGGRGDYNRRGRSNNNRHISPRFLENKANN
NNLCNEMEQLSLEVHENHQICNEENINHVENNGELPSNPNMSEMALKGAGDSSGRPKRYS
SLRQRSLPETSTYPTPPPQQVPPQHPPYYEAGYQTALYAPTESCVPTPSTQSQTATSAPL
ITPSAYQTFTPPPYSESYGLRMSVTPPPRLFPQVSVPAAQPILAPPPCITPAPTIMNFAP
PPPPAGYPFTYPQFTTPPPQPPPAPPSEIFQPGITYYYQPTQPQPIRPTTVQQKRAKAIP
IVPPPERETNRKEKIDPTLPNNSSHKYTDDANEADSVDITSVRTESSQLQSTVGVES
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcagagttgcttcgaaggagaagacaaaagtcggatgatgattcagaaaaatcattt
tctgaatctgatcttgaagttgaagatttaaacgatagtgctattagttcaaaagatact
cccgaaaaggctgtcccacttaaaactgctgatggctctgagtatgaaagtgcagaggaa
gaagaaaaaattcttgaaaaacctatcacccttgaccctttgacagaaccctgtgctgaa
ccctcagaacacctttcaggaacaagtgataatgaagaaactagtcctaaggaacaggaa
tctttgtcagaattggtggatgaagaaggaggagaggaaggtattgctgaaacggaagat
gttgaaggagaatttttgaatggtgatgatgctcctgaaaatggatctgaagatgaagag
tttgtcgaagaagagaggcagcaaggtgatggagaggaatgttcacctgcgagtgtagct
gctgaaaaggagttagattttgatgaagatcgaaggaatcctcagtatattcccaaaaaa
ggaatgttttatgaacacgatgacagggggaatagtgaagatgtgaaagaaaaacctgaa
gaacctccaagggataggaaaaagaagttatggcttgatgaaggcaaatggggtcatgac
cgttttcgtgaagaagagcaatttcctaaatcacgtaatgaattaatagatacctacggg
tatgacattaggaatgaggatggtcctcctcgagctagaagacggcgacgttacggacgt
ggacccaccaaatatgaccgtaattgggaagatgtaacagcttatggcagggaaaagttt
aaaatatcccctaggggctccccgagaggtcagagaggagttggccgctttagtaggggt
ggaaatcctaggttccgtggtcgagggcagcgtgcattgaatttctcagggcctagaaat
gaggatgaggaagaaggcctgaatacaaacacggctgaaaattttgttaataatgagaat
ggagaagctgaagtaaaggatgtagatgtacctcctgtcataaaccgggaagattttcct
gcattgcctaccaaaaataatgagccggaagtggaagaacctccactgaatagtttcagc
aaaagcccacctaaaattattgaggctcaatctgttagaacactcacttttgagaattct
agttatggtggaagaaattctattgaaagaaattctgttgaacgagatgtgcctccaaga
aggggcaagacacctccctttattaataaccatgaacgaggaaacaggcgcccaaatcct
cgtggacatcgaggttctggaaggggtgattatggtggaagaggggactacaatagaaga
ggtagatcaaacaataatcgtcatatatccccacgttttcttgaaaataaggctaacaac
aacaatctctgtaatgaaatggagcagttgtcactagaagttcatgaaaatcatcaaatt
tgtaacgaagaaaatattaatcatgttgaaaataatggtgaactaccaagtaatcctaat
atgtctgaaatggccctaaaaggtgctggagattcttctgggcgtccaaaacgatactct
tctttaaggcagcgaagtcttcctgaaactagtacttatccaacccctccaccccaacaa
gtacctcctcagcatccaccttattatgaagcagggtatcaaacggctctgtacgcccca
acagaaagctgtgttccaacacccagtacgcaaagccaaacagctacaagtgcccctctc
atcacaccatctgcatatcaaacttttacccctcctccttattctgaaagctatggcctt
cgtatgtctgtgacaccacctccaaggttatttccacaagtgagtgtacctgcagctcaa
cctattctggcaccaccaccctgcataacacccgctccaactattatgaatttcgctcca
ccacctcctccagcagggtatccgtttacttatcctcaattcactacgccaccacctcag
ccacctcctgcacccccaagtgaaatatttcaaccaggcataacttattattatcaacca
actcaacctcaacctataaggccaacaactgtacaacaaaaacgagcaaaagccatcccc
attgtacctccacctgaaagagaaacaaataggaaagaaaaaattgaccctactctgcct
aacaacagtagccacaaatatacagatgatgctaatgaagctgatagtgttgatattact
tctgttagaactgagtcttcacaattacaatccactgttggtgttgaaagttaa
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