Parasteatoda tepidariorum (common house spider): 107451194
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Entry
107451194 CDS
T06106
Name
(RefSeq) N-glycosylase/DNA lyase isoform X1
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
107451194
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptep03400
]
107451194
Enzymes [BR:
ptep01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
107451194
DNA repair and recombination proteins [BR:
ptep03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
107451194
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH
RecR_HhH
HHH_8
Motif
Other DBs
NCBI-GeneID:
107451194
NCBI-ProteinID:
XP_015922696
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All DBs
Position
3:complement(61870239..61880710)
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AA seq
340 aa
AA seq
DB search
MWRKLSCNFMELNLDITLGGGQSFRWTKLDIGHWIGVIENSVFSLKQDENGNLLYFVHRS
LNKGSNIDCDSLPSKRRKKTKKEPVYNSSQDSSYFESSLKDYFNLDIKLMDYYNVWSKAD
ENFKKVSEGYNGIRILRQPPVENLFSFICSANNNIPRITSMVEKLCSNYGEKIAECEGKL
FYTFPAIRRLAQDDVEAKLRELGFGYRAKYIAQTAKYLHEKKPDNWFTSLRNMPYEKAHE
ELQALPGVGAKVADCVCLMSLDKYNAIPVDTHIWQVTVKDYLPHLKNAKALTNKIYQQIG
DFYRERFGDYAGWANTVCMLHYFYFRVQVVRSKSEYAYAI
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgtaaattatcctgcaactttatggaattaaatctggatattactcttggtggg
ggccaatcatttaggtggacaaaattagacattggtcattggattggagtgatagaaaac
tcagttttctctttaaaacaagatgaaaatggtaatttattgtattttgtacatagatct
ttaaacaaaggatcaaacattgactgtgatagtttaccatcaaaaaggcgaaaaaagaca
aaaaaggaaccagtgtacaattcttcacaagactcatcttattttgaaagtagtttaaaa
gattattttaacctagatatcaagttaatggattattataatgtgtggagtaaagcggat
gaaaactttaagaaggtctcagaaggatacaacggtatcagaatattacgccaacctcct
gtagagaatcttttttctttcatatgttcagctaataacaacatacccagaattacaagt
atggtggaaaagttatgttcaaactatggagagaaaattgctgaatgtgagggaaaatta
ttttatacttttccagcaattagacgtttagctcaagatgatgtggaagccaaattaaga
gaactgggttttggttacagagctaaatacattgcacaaactgctaaatatttacatgaa
aaaaagcctgataattggtttacaagtttgagaaatatgccatatgagaaagctcacgaa
gaattgcaagctttacctggagttggagctaaagttgctgattgcgtttgtctcatgtct
cttgataaatataatgctattccagttgatacccatatttggcaagtgactgttaaagat
tatttgccccatcttaagaatgctaaagcgttaacaaataaaatatatcaacaaataggt
gatttttacagagaaagatttggagattacgctggatgggcaaacacagtatgtatgctg
cattatttctatttcagggttcaagttgtcagatctaaaagtgaatatgcctatgctatt
tga
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