Parasteatoda tepidariorum (common house spider): 107451579
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Entry
107451579 CDS
T06106
Name
(RefSeq) E3 ubiquitin-protein ligase Rnf220 isoform X1
KO
K25174
E3 ubiquitin-protein ligase RNF220 [EC:
2.3.2.27
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptep04121
]
107451579
Enzymes [BR:
ptep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107451579
Ubiquitin system [BR:
ptep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107451579
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNF220
zf-C3HC4_2
zf-C3HC4_3
zf-RING_2
zf-RING_5
zf-C3HC4
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
107451579
NCBI-ProteinID:
XP_015923212
LinkDB
All DBs
Position
7:complement(47239492..47337173)
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AA seq
598 aa
AA seq
DB search
MSSQNDKGTHDFKYETTTSAGHTYLQELCLENSAYLPNAMTNPAVMVLNSTCGGNVTPHA
QSHVTFARHPTGGRIESGKESIVSTAGAVPFPNPAFPVRPLFGQGDPYHLLSLQSLHHPA
LLASHALGRSYLNAGAFRPLAGLTDDRNGPFHGSAFMPAKCMKLDSHSPGSDISGATQPL
LLGNCFPGSGSESSFHQSPANSTGSSLGQTVGSFLDGKDDRGDSDSMADGADRMSETPNL
SEESRSIERSTPEDRGTPKRHKKFYFEGGQTPFCPICGQALQLSDLASHFEMEVERLPEI
RKCISQQVEVTSLHSPFSSPMCMVRKDDKGKPESRWETYQRVKSNRTTRLTSARCMIKRK
KWDDPNCTERSPEENLHMMPGLRKRESPETSIDSRTAAELNWAMSARMHAIAAVAFQRNL
SDFARNHEDENQELNVDEDDSAVYGQPHYTEADVITCSSEDNVDSKEQIRRIQSNDSDYQ
RHSDSTQWTVNGGNNNNGEGQEVTSTCVTNNDAGSECVSPSEKASKPSKDTNSDNPKEQM
EDGIKCLICMETFIKPVVSICCWHVHCEECWLKTLGTKKLCPQCNMITAAKDLRRIYL
NT seq
1797 nt
NT seq
+upstream
nt +downstream
nt
atgtcttcacaaaatgataaaggaacacatgatttcaagtacgaaaccacaacctctgct
ggacatacttatcttcaggaattatgcttggaaaattctgcctatttaccgaatgctatg
accaacccagccgtcatggtgttgaattctacctgcggcggaaacgtcacacctcacgcc
caaagccacgtcactttcgcccgtcacccgaccgggggacggatagaaagcggaaaggaa
agcatcgtgtccaccgccggagctgtaccttttcccaatcctgcttttcctgtaagaccc
ttatttgggcaaggagatccctatcatttactatcacttcaatcacttcatcatccagca
ttactagccagccatgccttagggcgtagttatctaaatgcaggggcttttcgcccgctg
gcaggtcttactgatgataggaatggaccatttcatggctcggcttttatgcctgcaaaa
tgtatgaaattagacagtcattctccaggtagtgatattagtggggcaactcagcccctg
cttttggggaattgttttccaggaagtgggagtgaatccagttttcatcagagtccagca
aattcaacaggatcatctttaggacaaacggtgggctcttttctggatggcaaggatgat
cggggtgatagcgattcgatggctgatggagccgatcgtatgtccgaaacgccgaatctt
tccgaggaatcccgatcgatagaaagatcgacaccggaagatagaggaacgccaaaacga
cataaaaaattttacttcgagggaggacaaacgccattttgtcccatatgtggtcaagct
cttcaactctcagatcttgcgagtcatttcgaaatggaagtagagaggttaccagaaata
cgaaaatgcattagccaacaagtagaagtgacatctttgcattcgcctttttcgtcccct
atgtgtatggtacgcaaggatgacaaaggaaaaccagaatccagatgggagacatatcaa
cgagtgaaaagcaatagaacaacaagactaacatcagcgcgatgtatgattaaacgaaag
aaatgggatgatcccaattgtacagagcgatcaccagaagaaaatcttcacatgatgcct
ggattgagaaaaagggaatctcctgagacgtctatagacagccgaacggcagccgaactt
aattgggctatgtcagccagaatgcatgccattgcagctgtagcttttcaaagaaatctt
tctgatttcgcaagaaatcacgaagatgagaatcaagaattgaatgtagatgaagacgac
agtgcagtgtatggacagccacattacactgaagctgatgtcattacatgttctagcgaa
gataacgttgacagcaaagaacaaatcaggaggatacaatcaaatgattctgattaccaa
aggcattcagattcaacccaatggacagttaacggaggaaataataataatggtgaaggt
caagaggtgacaagtacttgtgttacaaataatgatgctggcagtgaatgtgtttctccg
tctgaaaaagcttctaagcccagcaaggacacaaatagtgataatcctaaagagcaaatg
gaggatggaattaaatgcttaatctgtatggaaactttcatcaaaccagttgtgtcaata
tgttgctggcatgttcactgcgaagagtgttggttgaaaactctgggaactaaaaagttg
tgtcctcagtgcaatatgataactgcagccaaagatttgaggcgtatttatctatga
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