Parasteatoda tepidariorum (common house spider): 107451602
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Entry
107451602 CDS
T06106
Name
(RefSeq) vam6/Vps39-like protein isoform X1
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep04140
Autophagy - animal
ptep04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
107451602
04148 Efferocytosis
107451602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ptep04131
]
107451602
Membrane trafficking [BR:
ptep04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
107451602
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_WDR35_2nd
Motif
Other DBs
NCBI-GeneID:
107451602
NCBI-ProteinID:
XP_042910118
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All DBs
Position
9:28206339..28247894
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AA seq
890 aa
AA seq
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MHEAYEVIPIVQKLPPGLSIESISAYDDYLLVGTKSGTLLYYQLVPAPKAASKPGSIHYD
VKLLRSNKSFSKKAIVQLQVVPEFQMLICLAEGTVAAFDLSQCSLTPIAVLQKTKGAHFF
TISVNKHKNLDGEVYPSLTLCVAVKKKLQLFYWKPKILKFLEFSDDLLLRDIPRTIVWCG
ESLCVGYKSEYSLMKISGETKDLFPTGGNQLEPLVSLLPDEKLAVGSDEQTILIDSDGNP
TMKYSIKWSEVPLALVYDEPYLIAVLPSAVEVRPIEPRIHVQSIDLPKAKMIVTSKQGWV
FAASNSDVWLLHAVNFPEQITQLLSQKQFDLALRMAEMTPDSEIEKKQIVQRINNLNAFY
LFCKQNFKDAMEQFIKLETDPSHVIGLFPNLLPEEFRSSLEYPDRLPNLQGTELEDGLVA
LTNYLVEIRSRLLSDSNSSVPSMTAIMEPGKTKFRSKKQLLQIIDTTLLKCYLQTNDGLV
ASLLRMKENYCHIDESERALKLHQKYRELLILYNKKGMHRKALELLMRHAKKPDSSLRGH
EKTIQYLQDLGAEHLELIFEFAKWVLKEHPEDGLKIFAEEMTETEHLPRSLVLQYLCETE
PDLVIPYLEFIICKWDEENNLFHNTLVNKYCEKILVLLNDYRNALPEGHSPAPAGQEPGE
LGVLRKKLLLFLEGSEHCTVERFATYMMNKGLYDEGAVILGKLGRHDDALTIYIHILQNY
SKAERYCEKHYHKDKPGNQDVYLVLLKLYLPSAENQKINIPAVGYVPIPKPNIERAISIL
KQYSNKIDSFKALSLLPSVISVSDVKTFLECVLHSIQSQKYDVQLTKSLLYAEHLQVKAK
SIHFHSYKLTVTDLDMCRVCQKRIGKSAFAHFPTGVTVHYSCKDQYSAEN
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgcacgaagcttatgaagtcatacctattgtacaaaaattacctcctggtctctcaatt
gaatcaatatcagcttatgatgattatcttcttgttggaactaagtctgggacactacta
tattaccagttggtgccagctccaaaagctgcttcaaaacctgggtccattcactatgat
gtaaagttattgcggtccaacaagtcattttcaaagaaagcgattgtgcagttgcaagtt
gtacctgaatttcaaatgctaatatgccttgcagaaggtactgttgctgcttttgatcta
agtcagtgtagtttaacgcccattgcagttttgcagaaaacgaaaggagcacatttcttc
acaattagtgtaaataaacataaaaatcttgatggagaagtatatccctcactaactcta
tgcgtggctgtaaagaaaaagcttcaattgttttattggaagccaaaaatattaaagttc
ttagagttcagtgatgatttattactaagagatatccctcgtaccattgtgtggtgtgga
gaatctttgtgtgtaggatataaatcggaatactcacttatgaagatcagtggggagact
aaggatctctttccaactggcggaaatcaacttgaaccacttgtatctcttctccccgat
gaaaaattagctgtcggtagtgatgagcaaacaatattaattgactcagatggaaatcct
actatgaagtattccatcaaatggtctgaagtacccttagctttagtttatgatgagcct
tatttaatagctgtgctgccatctgctgttgaggttcgacccattgagcctcgcattcac
gttcaaagtattgatttaccaaaggctaaaatgatcgtcactagcaagcagggatgggtg
tttgctgcctctaactctgatgtgtggcttttacatgccgtgaactttcctgaacaaatt
acacaactcttgtctcaaaaacagtttgatttggctctccgcatggctgagatgacgcct
gactctgagattgaaaagaaacagattgttcagcgaatcaataacttaaatgcattttat
ctattctgcaaacaaaatttcaaagatgctatggagcaattcatcaagttggaaacagat
ccctcgcatgtgattgggttatttccgaatttactgcctgaagaatttcgtagtagcttg
gaatatcctgatagattgcctaatttgcaaggaactgagttagaagatggactggttgca
ttgactaattatcttgttgaaattcgaagtagacttctctcagatagtaatagttctgtg
ccatctatgactgcaataatggaaccagggaaaacgaagtttcgttctaaaaaacagctc
ttacaaatcattgacacgactttactcaaatgttacttacagactaacgatggattagta
gcctccttattgaggatgaaggaaaactactgtcacattgatgagtctgaacgcgctctg
aaattgcatcagaaatatcgggaattattgatactctataataagaaaggaatgcacaga
aaagctcttgaattgttaatgaggcatgccaaaaaacctgattcctctttaagaggccat
gaaaaaactattcagtacctccaagatttaggggctgagcatttggagctgatatttgag
tttgctaaatgggttttaaaagaacatccggaagatggcttaaaaatatttgcagaagaa
atgactgaaactgaacaccttccacgctcattagttttacagtatttatgtgaaacagaa
ccagatttagtgattccttacttagaatttattatatgcaaatgggatgaagaaaataat
cttttccacaacactttggtgaataaatattgtgaaaaaattctagtgctacttaatgat
tatcgaaatgcccttcctgaaggtcattctcctgctcctgctggccaagaaccaggagaa
ctgggagttttaagaaaaaaacttctgttattcttagaaggatctgaacattgcacagtt
gaacggtttgctacttatatgatgaacaaaggactgtatgatgaaggtgctgtaattttg
ggtaaattaggaagacatgatgatgccttaactatttacatacatattttgcaaaactac
tctaaagctgaaagatattgtgaaaaacactatcataaagacaagcctggaaatcaagat
gtctacctagtcctgttaaaattgtatttgccatcagctgaaaaccaaaaaattaatatt
cctgctgttggatatgtgcctataccaaaaccaaatattgaaagggctatatcaatatta
aaacagtattcaaataagattgattcattcaaggctttaagtttgttaccatcagtcata
tctgtaagtgatgtcaaaacctttttggaatgtgttcttcacagtattcaaagtcaaaaa
tatgatgtgcagctaacaaaatctcttctatatgctgagcatttacaagttaaagctaaa
agtatccattttcattcatacaaattaacagttactgatttagacatgtgccgagtttgt
caaaaaagaattggtaaaagtgcctttgctcattttccaactggtgttacagtccattat
tcttgtaaagatcaatattctgctgaaaattaa
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