Parasteatoda tepidariorum (common house spider): 107451668
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Entry
107451668 CDS
T06106
Name
(RefSeq) zinc finger CCHC domain-containing protein 7
KO
K12597
protein AIR1/2
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107451668
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107451668
03016 Transfer RNA biogenesis [BR:
ptep03016
]
107451668
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
107451668
Transfer RNA biogenesis [BR:
ptep03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
107451668
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
AIR2-like_ZnK4
Motif
Other DBs
NCBI-GeneID:
107451668
NCBI-ProteinID:
XP_015923318
LinkDB
All DBs
Position
10:44611047..44638429
Genome browser
AA seq
474 aa
AA seq
DB search
MFAVEYKNEKAMDVSSDEEPYDSDLIDSDVEAELYSVIHHETDNSTLNFENSYHSLNSSN
KENASTILDYKEFSTIANVSFESNQNMLKNNNSITSSNVQVIEITDKLADDKINKNTYLN
SLADFSFKRKSDSAFDDTQASKKQKNNEENTSKSQNLINLKSNETVVLNSSDISSEEDDD
NDIICLGPLNSQKHFETNVSEIIITDSDSNSADSWCFKSPKFNTSIPSGTRTKDQWFVNA
NDIYRSRRSSSRYHESQFMTCSRCNQKGHSFKFCSFSKGMRCFICGSGRHSSFGCKSKVC
AKCFGIGHDIRECPRELDFCEMCQMPGHRREICPDLWRRFQRTTPKKSKKIWRLSQDRPF
FCYNCGLPGHFGALCKGRRMNTLAFPTWPFVLNYKEQNQSQVNPVINVSNEKSIMATQQH
FPKGKNKKMKVKKTLPDLGNIQQITFPRTPKNSQGKPQNETIVLRKTQNQEKNS
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcagttgaatacaagaatgaaaaagcaatggatgtctctagcgatgaagaacca
tatgatagtgatttgatcgatagtgatgttgaagctgaattatacagtgttatacatcat
gaaacagataattctactctaaattttgaaaattcctaccactctttaaattcttcaaac
aaggagaatgcttccacaattttagattataaggaatttagtactattgctaatgttagt
tttgaatctaaccagaatatgttaaagaacaacaatagtattacttcatctaatgttcaa
gtaattgagataactgataaattggctgatgataaaattaataaaaatacttatttaaat
tctttagcggatttttcctttaaacgaaaatccgattcagcgtttgatgatactcaagct
tctaaaaagcaaaaaaacaatgaagagaatacttctaaaagtcaaaacttaattaattta
aagtctaatgaaactgttgttttgaactctagtgatatttcaagtgaggaagatgatgat
aatgatattatatgtttaggaccattaaatagtcagaaacactttgaaacaaatgtatct
gaaattattataacagattctgattctaacagtgctgatagctggtgtttcaaatctcct
aaattcaacacatctattccaagtgggactagaaccaaagatcaatggtttgtaaatgct
aatgatatatatcgttcacgtcgaagttctagccgttatcatgagtctcaatttatgact
tgttctcgttgcaatcagaaaggtcattcttttaaattttgctcattttctaaaggtatg
agatgttttatatgtggtagtggccgccatagctcctttggatgcaaaagcaaagtttgt
gcgaaatgctttggaattggtcatgatatcagggagtgtccaagagagcttgacttttgt
gagatgtgccaaatgccgggccatcggcgagaaatctgtccagatttatggagaagattt
caaagaactactccaaagaaatcgaaaaaaatttggagactatcccaagatagacctttc
ttctgctataactgtggtttacctggacattttggtgctttgtgtaagggtcgtcggatg
aatacacttgcatttccaacttggccatttgttttaaactacaaagagcaaaatcaaagc
caagtaaatcctgtcataaatgtttcaaatgaaaaatctatcatggctacccaacaacat
tttcccaagggaaaaaataaaaagatgaaagtgaagaaaactctgcctgatctgggtaat
atacagcaaattacattccctaggactccaaaaaatagtcaaggaaagcctcaaaatgag
acaattgtgttgagaaagactcaaaatcaagagaaaaactcctaa
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