Parasteatoda tepidariorum (common house spider): 107452279
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Entry
107452279 CDS
T06106
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107452279
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107452279
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107452279
mRNA degradation factors
5'-3' decay
Lsm complex
107452279
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107452279
NCBI-ProteinID:
XP_015924124
UniProt:
A0A2L2Y8L0
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Position
7:44365718..44366119
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AA seq
133 aa
AA seq
DB search
MSSLPGLCTLLEEVDKKIMVELRDGRILIGFLRSIDQFANLVLHRTVERIHVGKKFGEIA
LGVFIVRGDNVVLLGEVDDNKDSTSKLIRVSQEEILEAQVTEQKLKQDKEKMRTKALKER
GFGYQLDTTHEDF
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcttcctgggctatgtacattactggaagaagtagataaaaaaattatggtg
gagctgagagatggaagaatattaataggtttcttaagaagtatagaccaatttgcaaat
ctagttttgcataggactgttgaaagaattcatgttggtaaaaaatttggtgaaatagct
cttggtgtttttatcgttagaggcgacaatgttgttttgcttggcgaagttgatgataat
aaagacagtacttcaaaactaattagagtttctcaagaagaaattctcgaagctcaagtt
accgagcaaaaattgaaacaagataaagaaaaaatgcgaaccaaagccctgaaggaaaga
ggatttggatatcaattggatactactcatgaagatttttaa
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