Parasteatoda tepidariorum (common house spider): 107453652
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Entry
107453652 CDS
T06106
Name
(RefSeq) superkiller complex protein 3 isoform X1
KO
K12600
superkiller protein 3
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107453652
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107453652
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
107453652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_19
TPR_CcmH_CycH
TPR_1
TPR_14
TPR_8
TPR_17
TPR_12
TPR_11
TPR_16
ANAPC3
TPR_10
TPR_9
TPR_Slam
ARM_TT21_C
TPR_15
TPR-S
HEAT_Nup120
ChAPs
DUF2989
BTAD
DUF6184
Motif
Other DBs
NCBI-GeneID:
107453652
NCBI-ProteinID:
XP_042895615
LinkDB
All DBs
Position
5:87375861..87449181
Genome browser
AA seq
1497 aa
AA seq
DB search
MASKDTKSLLKQAREAIKEKDFKSALKFCKVVLQSEKDNYNAWVFVGVAAQEIDQPDQSV
AAFKRAIEISPKQPLAWQGLCSFYEKNESPENIPKLVSVYKELLELSSPDKKLDIFDKLI
PLLRKLNDKEKVIKTLKLKLELVKGTKEENAIYRSIFSELTGITKLTTVDMETQIEVLQK
LVDLDEFSEDDCQRIISDCVNPLYKEGEESHSLKLAFIIFRKHPNNLACLEFISRAAMNF
YIEKDLPLNGLENISEKIKSYEKMNSKGLPQIFEGFCSFVSKNYFQAIQKLKEGLSKMEY
CVQGWYFLSKSQLKLHQYSDAEVSATTAITVGRKSKVSSKWIGKFYLNLGQVLLGRQNWD
GTIGALEKCLEYMEQTKEMRVTLCFTLLRIGKISNAEQILHDLKEKYPEDPEILQLEGYS
LLLKKDLIQALQRFRLSVSLQESSFTLHLIGVVLWETKQGEKAFKVFMKAAESDPYFAKN
FLYLGHHYYFNLNDKSKAVLCYEKAFSLDNSDTEIGMSLSQMLKELKKEEENMIVLKKIT
ENASLGSCKWAWTQLGLYYLEKNNFNDAIFSLQKALRADPDSSHGWECLADAYFKRGSYE
SALKAYERVYEINSRAMYPLYQIATIQKMRGIFTEAIEKFKSLLNTVPTYIPALIGLAES
LVLHARRALDDCLFGVAKDSCQEALDILSRVAKTNNGLSCLWKLAGDACTIPYHLNEKWF
PFNVPVELVQDSKICESVSCDKLQILSFGARFFGRALLIKDSVSTLWHDLGVNYHYQSTL
SNNPFEFSKKAFTCLQKAISICPINDAHWRTLGVIALGEGLKDFAFGQHALVKSLLVNRH
DAETWTNLGILYLLNQNIKLSHFAFKMAQSAEPSYPLSWIGQAFIAEKVKHSETLDLFRH
ATTLGSHNEALAGYSKAVCEALLNTEDKNSLSYKYNIEEMDAVVRAADCSIKFIANNHNS
AEMNNILGILLERQRICNGSLLAYERALNLMKDNNETEFDLAVRINFARVLSSVGQMKEA
IKNFLLVTKKTSDDTSVICSLAFALYKDKQYEPALKLFAQAFEKCKIPANKSHIKVAMAM
VATNIKGPDSPNHLTLLFESIQISPASVYGLLALYSGGILNEKLDLLLAARKELYPYRFT
QQYASSTALLWASHYYIMKGTRPARNELLKYMHCLPSDNKIWLQAAACLLQWGSESVAAY
CTKVSVFHGGCKEEASQIFALSQMSNRKEALSAAQKVVHINPGKLTNWATLAAACHVADL
DRKHVGWMFGFVKKLAKEQKVKPDFLGWLVVMEIFHHINCGDLSAASTLMSQVLPIKSFN
SEITSCLQILDAVIKVFSSSSGNLQPLFLAIKNNPKSFFGWSVLSQLLLDSGNDVEAEKM
LSHFIVSCEKMFPKWTAYPLLQLAILSYRALQVAQLPEEREKWLHLGVEVSGKAVHAVPS
NQAARFLQGLFALESGNTSLARRCFEKASALQSNGRKGMWMEKMANDILMHKNLKRK
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atggcaagtaaagacacaaaatcccttttaaagcaagcccgtgaagctattaaggagaaa
gatttcaaatctgctttaaaattttgcaaggttgttctgcagtctgaaaaagataattac
aatgcttgggtttttgtgggagtggctgctcaagagatagatcaacctgatcaatcagtt
gctgctttcaagagggccatcgaaatatctccgaagcaaccattagcttggcaggggctc
tgcagcttttatgaaaagaatgaatctccagaaaatattccgaaacttgtatctgtttat
aaggaattattagagttatcttctccggataaaaagttagatatttttgacaagttaatc
cctcttttaagaaagctgaatgataaagaaaaggttataaaaacattgaaactaaagctg
gaacttgtgaaaggaacgaaggaagagaatgccatctatagaagtatattcagtgaattg
actggtattacaaagctcacaactgttgacatggaaacacaaattgaagttcttcagaag
ttagtggatcttgatgagttttctgaagatgattgtcaaagaattatttctgactgcgtc
aaccccttgtacaaagagggtgaagaaagccattctctgaaattagcttttataattttc
cgaaaacacccaaacaatttggcttgtttagagtttatcagcagagcagccatgaatttc
tatattgagaaagatttgcctttgaatggattggaaaatatttctgaaaaaataaagagt
tatgaaaagatgaattctaaaggtttgcctcagatatttgaaggattctgctcttttgtt
tccaagaactattttcaagccatacaaaaattaaaagaaggtctgagtaaaatggaatat
tgtgtgcaaggttggtattttttgtcaaaatctcagttgaagttgcatcaatatagtgat
gcagaagtcagtgctacaacagctattacagttggtagaaaatctaaagtgtcttctaag
tggattggaaagttttatttgaatttaggtcaagtgctcttaggaagacagaattgggat
ggaacaataggagctttagaaaaatgcttagagtatatggagcaaacaaaggaaatgcgt
gtcacactttgcttcactctcttaaggattgggaaaatttctaacgcagagcagattttg
catgatttaaaagaaaaatatcctgaagatcctgaaattctacagcttgaaggttattct
ttacttttaaaaaaagatttgattcaagcgttacaaagatttcgcctttcggtatcactt
caagaatcttcattcactttgcatttaattggtgttgttctttgggaaaccaagcaggga
gagaaagcttttaaagttttcatgaaagcagctgaatctgatccttattttgccaaaaac
tttttatatcttggtcatcattattacttcaatcttaatgataaaagtaaagcagtcctc
tgttatgagaaggcattctctcttgataattctgatactgaaatagggatgtctctgagt
cagatgctgaaagaactaaaaaaagaagaagaaaatatgattgttttaaagaagatcacg
gaaaatgccagcttaggcagctgcaagtgggcttggactcaacttggtctttactatttg
gaaaaaaataattttaatgacgctatattctctctacaaaaagccttaagagctgatcct
gatagcagtcatggctgggaatgtctggctgatgcatactttaaacgtggaagctatgaa
tctgcattaaaagcctatgaaagagtgtacgagatcaattcaagagcaatgtaccctttg
tatcaaattgcgacaattcaaaaaatgagagggatcttcacagaagccattgagaaattt
aagagccttttaaatacagttccaacatatattccagctcttataggattggcagaatca
ttggttttgcatgccagaagagctttggatgattgtttgtttggagttgcaaaggattcc
tgtcaagaggctttggatattttgtccagagttgcaaagactaataatggactttcttgc
ctttggaagttggcaggagatgcatgcactattccatatcacctcaatgagaaatggttt
cctttcaatgtacctgttgagcttgtgcaggattccaaaatatgtgaatcagtttcctgt
gataaacttcagatactttcttttggagcaagattctttggacgcgcattgcttattaaa
gattccgtgagtactctctggcatgatctgggtgtaaactaccattaccagtcaaccctt
tccaataatcctttcgagttttctaagaaagctttcacctgtcttcaaaaggcaattagt
atttgtcccattaatgatgctcattggagaactcttggggtgatagctcttggagaagga
ttgaaggattttgcatttggccagcatgctctggtaaagtcacttctagtcaacagacat
gatgcagaaacttggacgaatctgggcattttatatttgttaaaccaaaatattaagctt
tctcacttcgctttcaaaatggctcagtctgccgaaccaagttatcccctcagttggatt
ggccaagcattcattgctgaaaaagtgaagcattcagaaactctggatctttttagacat
gctacaacacttggatctcacaacgaagcactcgctggttattcaaaagcagtgtgtgag
gcacttctgaatactgaggataaaaactctctatcatataaatataacattgaagagatg
gacgcagttgtccgtgctgctgactgttcaataaaatttatagccaacaatcataattct
gctgaaatgaataacatattaggaatattgttagagagacagcgtatatgtaatggatcg
cttttggcttatgaaagagctttgaatctcatgaaggataataacgaaactgagtttgat
ctggcagtacgaataaattttgctagagtattaagttctgttggccaaatgaaagaagct
atcaaaaatttccttctagtgacaaagaaaactagtgatgacacttctgtgatctgcagt
cttgcatttgctttgtacaaagataaacagtatgagccggcattaaaattatttgcccaa
gcttttgaaaagtgcaaaatccctgcaaataaatctcacattaaagttgccatggctatg
gttgctacgaatataaaaggacctgattctcctaatcatttaactttgttatttgaaagc
atccaaatctctccagcctcggtctatggattgttggctctgtactctggaggtatactt
aatgaaaaactggatctactattggctgcaagaaaggagctctatccttacaggtttacc
cagcaatatgcatcctctactgctttactatgggcttctcactattacattatgaaaggt
accaggcctgcacgaaatgagttgctgaagtacatgcattgtttgccttctgataataaa
atctggctgcaggctgcggcgtgccttcttcagtggggttcagagtctgttgctgcatat
tgcacaaaggtcagtgtctttcatggaggctgtaaagaagaagcttctcaaatatttgcc
ttgagccagatgtccaatcgaaaggaagctctctctgctgctcagaaagttgtgcacata
aatccagggaagttgaccaattgggctacactagcagctgcctgtcatgttgcggacttg
gatcgaaaacatgtaggttggatgtttggttttgtaaaaaaattagcaaaagagcagaag
gtgaagccagattttttgggatggcttgttgtaatggagatattccatcatattaattgt
ggagacttatcagctgccagtaccttaatgagtcaggttcttccaataaaatctttcaat
tccgaaatcacgtcgtgtctgcaaattctcgatgctgtgataaaagtattttcatcttca
agtggaaacctgcaacctctctttttagccatcaaaaataatccaaaatccttttttggc
tggagtgtactcagccagttgttgctcgattcgggaaatgatgttgaagctgagaaaatg
ctctcacattttattgtatcctgtgaaaaaatgtttcctaagtggactgcctatcctttg
ttgcaacttgccatcctatcttacagagctttacaagttgcacaactccctgaagaaaga
gaaaagtggctccatctaggtgtagaagtgtctggaaaagccgtccacgcagtaccctct
aaccaggcagcacgtttcttacagggcctctttgcattggaatctggaaacaccagcttg
gccaggaggtgttttgaaaaagcttctgcgttgcagtccaatgggaggaagggtatgtgg
atggaaaagatggccaatgatattttgatgcacaaaaacttgaagagaaaataa
DBGET
integrated database retrieval system
