Parasteatoda tepidariorum (common house spider): 107453729
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Entry
107453729 CDS
T06106
Name
(RefSeq) E3 ubiquitin-protein ligase RBBP6
KO
K10624
E3 ubiquitin-protein ligase RBBP6 [EC:
2.3.2.27
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptep04121
]
107453729
Enzymes [BR:
ptep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107453729
Ubiquitin system [BR:
ptep04121
]
Ubiquitin ligases (E3)
U-box type E3
107453729
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DWNN
zf-CCHC_2
zf-C3HC4_2
zf-C3HC4_3
zf-CCHC
zf-RING_5
zf-RING_2
zf-C3HC4
zf-C3HC4_4
U-box
zf-RING_6
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
107453729
NCBI-ProteinID:
XP_042897833
LinkDB
All DBs
Position
7:22462858..22509482
Genome browser
AA seq
1722 aa
AA seq
DB search
MSVHYRFKSNIGQDTVIFDGLYISVADLKKSIMQQKRIGKSSDFDLQITNAQTKEVYDND
EVLIPKNTSVLVARIPVQGGSKKNWDKPDLPLPIDDDDLGGHIRYDKIAKSADLLNANTS
EEDKVKAMITQSSVEYDPSKYMKSRSMTGPLPPAYMCYRCGKSGHWIKNCPTNNPDVKRS
TGIPRSFMVPVDGPEHKGALLTSSGEFAVPLIDHQAYKEVKKEKPPFVPQDDPVPEPEAE
IPEELLCMVCKDLLQDAVLIPCCGNSFCDECVRQVLLESDNHECPVCHDIDVSPNTLIPN
RFLRTAVLNFKNETGYTRVKRAAFMKPSPIPERNLSPQPSPDSTVESQSQMETTSRVEIK
TEILEPEKKTSETENKPLEQETPSTEGDALKVDTGSIASGNSAEKPRTPDLKLDDDSQNI
SQPGTPLADEPADNDVSDNRPIQAINQDQYTNKRNYDYPGHSRYGRGHRDNYRRHKEDSP
EVRAISTIETIGTTRGRYGTRPFRQHFTSQRDDRGDSYGQDEDYHGRYDKRHHSDRGGSQ
KTHNTHYDRPPRMSRYHPSGNVHHYSESDHSRHDSPYNLPRHNEEPMHKHQDRYRSPPHS
VPIPAALPPPVFPPPPSVPLPPPAVIAAPPVYPPQPPPPGASPIDTSHLGAQPPPPGVGP
LMPLPLTSENQPYMSRRYESEDPLKDSKKDERSIDDRLEAFQRELEKRDRKDNRDRLSRS
RSRSSGRHRSRSYSSSKSWSHSASRSLSRTPRSRSRTPFSSRSRSRSYSYSRSRSWSKVR
SYTRSRSRSRTKSRSRSRSRVRRRRYSRERPRSPRPRSRSKSYSPKEYRAPSHRSLPYSG
KHSYSSPQYVSSYQSQYGQPPNILPLPVMRPPPYHIHPILPVQPMHTRPMDHYPVDRAPK
YASLNDQYPAYDSYPTHKYQRYDREQRGYEKTGSYDKNIRYDKRQDYSRHEDEEAPHRIP
GWVGERPREYKPKYGRPRDQRKEIKELPKIPEHEMRVLHSKELDNEPSSKERLKEERKAS
KPAKEKEEKVIKHKKHHHHHKSKDLKKQETKVTSSANVEKEADLYRSKTEEFENEENNEV
PAVEAKVTKAAEKVKDKKHKHKKHKVGEQTVKKKKTAKKEKGEAVTSTNTDVPTKVKKKK
TKIKQPPPESNIEEHEVKLEKAPSPLPESVEPAVDPAEAVVPTSETEAVDKSLEEPELKI
QVDSETAEFITEELNEEDINETEMKDENDAAETGHIEETVNSEEEIEEEEEEEDVLRVDV
PGLSKWERDSGAEDVEEDAVRPQRRSSVVVSKEETLPSEIIQKAEKVFLSHQMKPRIDTK
DESDDSKDSSDESSSEASPVKQKDGVELKSVVKTERLPKSELRVIVSKEKRSVHSRKEDS
GARDESQSRRYQRDNRGHSTRHRDDDIAPRRTITLHSSNADEKYREPRERVSQRRDRRYS
PKREIVTGRSSSRDHSYRHESGYRDNDTIRREERRRRFAEPEPRHDRQIEHSRLIERSDR
RRAHDDGVSYSKNKREVRSSEQPRKSVKHRRSRSKSFESLDSSNSYSKRNERSNLTIKSK
EQHRERKDDDRARAERSESLRRKHSPIKPPEKHSKPSRKDDFDALKFEPDYDEFSDVEEK
EPEKERSKRKSATPDTSRKRIKLEKGDESISRRITRHSITSSASSSAVSASDSSDSDDQK
VSKSKNSDSEHKQKHKKSRHKKHKKHKHKHKKKKSHKSKKSE
NT seq
5169 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtccattaccgattcaagagcaatattggccaggatacagtaatttttgatggc
ttatacatatcagttgctgatttaaaaaaatcaattatgcaacagaagaggatcggaaaa
agctcggactttgatcttcaaataacaaatgctcaaacaaaagaagtttatgacaatgat
gaagttcttattccaaaaaatacttcagttctagtggctagaattcctgttcaaggtgga
agcaaaaaaaattgggataaacctgatcttccactaccgatagatgatgatgacttaggg
ggccatattcgttatgataaaattgctaaaagtgcggatttactaaacgcaaatacatct
gaagaagacaaggtcaaggcgatgatcacacaatcatctgtcgaatatgatccatctaaa
tacatgaagagccgtagtatgacaggaccacttccccctgcttatatgtgttatcgatgt
ggcaaatccggtcattggataaaaaattgtcccactaacaatccggatgtgaaacgtagt
acaggaatccctcgtagttttatggttcctgtagatggtcctgaacacaaaggggctctt
cttacgagttcgggtgaattcgctgttccattaattgatcaccaagcatataaagaagtg
aagaaagaaaagcctccttttgtgccccaggatgatccagttcctgaaccagaagctgaa
attccagaggaactactatgtatggtgtgcaaagatctgttgcaggatgctgttttgatt
ccatgttgtggaaatagtttttgtgacgaatgtgtccgtcaagtacttttagaatcagat
aatcacgagtgtcctgtttgccacgatatcgatgtttcaccaaatactttgattccgaat
cgttttctgagaacagctgttttgaatttcaagaatgaaactggttacactagagtaaaa
agggccgcttttatgaagccatcacctatacctgagcgaaacttatctccccaaccttct
ccagattcaaccgtagaaagtcaatcccagatggagacaacttctagagtggaaattaaa
actgaaatattggaaccagaaaagaagacttctgaaactgaaaataaaccattagagcaa
gaaactccatctacagaaggagatgctcttaaagttgatacaggtagcattgcttctgga
aatagtgctgaaaaacctcgtacaccagacttaaagctagatgatgattctcaaaatatt
tctcaacctggaacaccattggcagatgaacctgctgataatgatgtaagtgataatagg
ccaatacaagccattaatcaagatcaatatactaacaaaaggaactacgattatcccggg
cactcgaggtatggccgtggccatcgtgacaattatcggcgacataaagaagattctcct
gaagttcgagctatcagcacaattgagactattggtactacgcgaggcagatatggaaca
agaccatttcggcaacatttcacaagtcaacgtgatgatagaggcgattcttatggtcaa
gatgaggactatcatggccgttatgataaaagacatcattcagacagaggtggttcgcag
aaaacacataacacccattatgacaggccaccaagaatgtcaagataccatccatctgga
aatgttcatcattattctgagagtgatcattcccgccatgattctccgtacaaccttcct
cgccataacgaagaaccaatgcacaagcatcaagacagatataggtcaccaccccattct
gtgcctattcctgctgctttgccacctccagttttccctcctcctcctagtgttccttta
cctcctccagcagttattgcagctccacctgtatatcccccacaaccacctccaccaggt
gcatctcctattgacacctcacatttgggagctcaaccacctcctccaggtgttggacct
ttgatgccactacctcttacaagtgaaaaccaaccttatatgagccgtcgttatgaaagt
gaagatcctttaaaagactctaaaaaggatgaaaggagtattgatgatcgtttggaggct
ttccagcgtgagcttgaaaagcgtgatcgaaaagataacagagatcgtttgtcacgtagc
aggagtcgaagttctggccgtcatagatcccgatcatattcgtcttcaaaatcctggtct
cattcggcaagccgaagtttgtcaagaactccaagatcgaggtctcgtacacctttctct
agtagatcgagatcacgctcttattcctactctagatcaagatcttggtcaaaggtcaga
tcttataccagatcccgttctcgctccaggacgaagtccagatctagatcgagatcaagg
gttagacgaaggagatattctcgtgagaggccgcgctctccaagacctcgttcaagaagt
aaatcctattctcccaaagaatatcgtgccccttcccacagaagccttccttattctgga
aagcactcatattcttcaccccagtatgttagttcatatcaatcacaatatggacaaccc
ccaaatattctcccattgcctgttatgaggcctccaccttatcatattcatccaattctt
cctgttcagccaatgcatactcgacctatggatcattatcctgttgatagagctcctaag
tatgcttcgttaaatgatcaatatcctgcctatgattcatatcctactcacaagtatcaa
agatatgacagagagcaaagaggatatgagaaaactggaagttatgataaaaatattaga
tatgataaaaggcaggactattctagacacgaggatgaggaggctcctcatagaatccct
ggttgggttggtgagaggccaagggaatataaaccaaaatatggaagacctagagatcaa
agaaaagaaataaaagaattacccaaaatccctgagcatgaaatgagagttctgcattca
aaagaacttgataatgagccttcttctaaagagagattaaaagaagaaagaaaagcttca
aaacctgctaaagagaaagaagaaaaagtcattaagcataagaagcatcatcaccatcat
aagagcaaggatcttaaaaaacaagaaactaaggttacttcttctgccaatgttgagaag
gaggcagatctatacagaagtaaaacagaagaatttgaaaatgaagagaacaatgaagtg
cctgctgttgaggctaaggtaactaaagctgcagaaaaggtgaaagataagaaacacaaa
cataagaagcacaaagttggagaacaaactgttaagaaaaagaaaactgcaaagaaggag
aagggtgaagcagtaacaagtactaacacagatgtacctacaaaggtaaagaaaaagaag
actaaaattaaacagccaccacctgaaagtaatattgaagaacacgaagtgaagcttgaa
aaggctccatcaccattacctgagtcagtagaacctgcagttgatcctgcagaagctgtt
gttcctacttctgaaactgaagcagttgacaaatctctggaagaacctgaattgaagatt
caggttgatagtgagacagctgaattcatcacagaagaactaaatgaagaagacattaat
gaaactgaaatgaaagatgaaaatgatgccgcagaaactggacatattgaagaaactgtt
aatagcgaagaagaaattgaagaggaagaagaggaggaggatgttcttagagtagatgta
cccggtttatctaagtgggaacgtgatagtggagctgaggatgttgaggaagatgctgtg
agacctcaaagaagaagctctgtagttgtttcaaaggaagaaacacttccctctgaaata
attcaaaaagctgagaaagtgttcctttcccaccaaatgaagcctagaattgacacaaaa
gatgaaagtgatgattcaaaagattctagtgatgagtctagtagtgaagcatctcctgtc
aagcaaaaagacggtgtcgaattgaaaagtgttgtcaagacagaacgcctacccaaaagt
gaacttcgtgtaattgtttctaaagaaaagcgatctgttcattccagaaaggaagatagt
ggtgcaagagacgagtcccaatctagaagataccagcgtgacaataggggtcacagtacc
cggcatagagatgacgatattgctcctcggagaaccataactttgcattcttcaaatgca
gacgagaaatacagagagccaagagaacgggtttctcagcgtagagacagaagatacagt
cctaagcgggaaattgtcacgggcaggagcagttctagggaccatagctataggcatgag
tcgggatacagggataatgatacgattcgaagggaagaaagaaggcggaggtttgcggaa
cctgaacctaggcatgacaggcaaattgaacatagtcgattaattgaaaggtctgataga
agaagagcccatgatgatggtgtatcttactcaaaaaataaaagagaggttcggtcgtct
gaacaaccacgcaaatcggttaaacatcgaaggtctcgttcaaaaagctttgaatcttta
gatagctctaattcatacagcaagagaaacgaaagatctaatttaacaattaaaagtaag
gagcagcatcgtgaaagaaaggatgatgatcgagcccgagctgaacgaagtgaatccttg
cgaagaaaacattccccgattaaacccccagaaaaacactccaagcctagtcgtaaagat
gactttgatgctctgaaatttgaacctgattatgatgaatttagtgatgtagaggaaaaa
gaaccagagaaagaacgctctaaaagaaaaagcgcaacaccagatactagtagaaagcgg
ataaaactggaaaagggtgatgaatctatcagcagaaggattacaaggcatagcattacc
agtagtgctagttcttcagcggtcagtgcaagtgattcgtctgattctgatgatcagaaa
gttagcaagagtaaaaattcagattctgaacacaagcaaaagcataaaaaatcacgtcat
aagaagcacaagaagcataagcacaagcataaaaagaagaaaagccacaaatcaaaaaag
agtgaataa
DBGET
integrated database retrieval system
