Parasteatoda tepidariorum (common house spider): 107453754
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Entry
107453754 CDS
T06106
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep04120
Ubiquitin mediated proteolysis
ptep04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
107453754
04120 Ubiquitin mediated proteolysis
107453754
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptep04121
]
107453754
Enzymes [BR:
ptep01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
107453754
Ubiquitin system [BR:
ptep04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
107453754
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_16
zf-RING_11
zf-C3HC4_3
zf-RING_5
zf-ANAPC11
zf-HC5HC2H
zf-RING-like
DUF1192
zinc_ribbon_16
TadE
zf-C3H2C3
FANCL_C
RINGv
zf-Nse
Motif
Other DBs
NCBI-GeneID:
107453754
NCBI-ProteinID:
XP_042903423
LinkDB
All DBs
Position
1:complement(26975197..27002056)
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AA seq
593 aa
AA seq
DB search
MRAALLSAGSVLLTLGVVGNAYYHKKQFYPSVVYITKSNPSMGVIYIQAFVLVLLLGKLM
RKIFFGQLRAAETEHLIERSWYAVTETCLAFTVFRDDFSPKFVALFTLLLFLKCFHWLAE
DRVDYMERSPVISLLFHIRVSSLLILLAILDFCFVNHAYQSTVTKGASVQLVFGFEYAIL
LSIVFNILMKYILHFYDLQSENPWENKAVFLLYSELVMGFFKVVLYLLFMTIMIKIHTFP
LFAIRPMYLSLRAFKKAVNDVIMSRRAIRNMNTLYPDATAEELATMDNVCIICREEMSGS
GSSKKLPCNHIFHASCLRSWFQRQQTCPTCRMDVLRVPAPAQPAQNAPVPGVGIPGAQQQ
QPQAPNIANWPGFLPNAFPGVFPFMMPPVPPQQQQPAPQVAHPANAPQSQQASAPAGGQP
GPSTSSGPSTSAGTQPTNAPPLFMPPFPCMPFFLPPPPPIPAADLSSLSVEELQAMEGQE
RENLEARIRCLRNIQTMLDGAVLQMQQYSSLVASMRSVPVSTPSQNNVKNSNPSTKTESG
PTMNGHMSSSEHSSHANTSSSTDPAEELRRRRLEYLQGNASAADRDDNREQHN
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgcgggcagcattattgagtgctggtagtgtcctactgacactgggtgtagtaggcaat
gcatattatcataaaaagcaattttatccttctgttgtatacattactaaatcgaatcct
agtatgggggtcatttacattcaagcatttgttttagttcttttgttgggtaaacttatg
agaaaaatattttttggtcagttgagagctgctgaaacagaacaccttattgagcgatca
tggtatgcagtaacagagacatgtcttgcatttactgttttcagagatgatttcagtcct
aagtttgttgctctctttacgttactcctgtttttaaaatgttttcattggcttgctgaa
gacagagttgattatatggaaaggagtcctgttatttcgttactttttcatatcagagtt
tcatctcttcttattcttcttgctattttggatttttgttttgtcaatcatgcatatcag
agtacagttaccaaaggtgcatctgttcaattagtatttggttttgaatatgccatatta
ctgagtattgtcttcaacatattgatgaagtacattcttcatttctatgatctccagagt
gaaaatccttgggaaaataaagctgttttccttctttacagtgaactagtcatgggtttt
ttcaaggttgttttatatttattattcatgaccataatgataaaaattcacacatttcca
ttatttgcaataaggcctatgtatttaagtttaagggcatttaaaaaagctgtaaatgat
gtcataatgtctcgtcgagcgatacgaaatatgaatactctatatcctgatgcaacagct
gaagaacttgccaccatggataatgtttgtattatttgtcgtgaagagatgtctggatct
ggaagtagcaaaaagttgccttgcaatcatattttccatgcatcatgtttgagatcatgg
tttcagagacaacagacctgtccgacttgtcgaatggatgtgctacgagttcctgcacct
gctcaaccagctcagaatgctcctgttcctggtgtaggaatccctggagctcaacagcag
caaccacaagcacctaatattgcaaattggcctggtttcttacctaatgcttttcctgga
gtatttccttttatgatgccacctgttcctccacaacaacaacagccagctccacaagtt
gctcatcctgcaaatgctcctcaatctcaacaagcctctgctcctgctggtggtcagcct
gggccatcaacttcttctggaccttctacgtctgctggtactcaacctacaaatgcccct
cccttatttatgccaccttttccctgcatgcctttttttctacctccacctcctcccata
cccgctgcagatctcagttctttatcagtggaagaattacaagccatggaaggacaggaa
agagaaaatctggaagccagaataaggtgtttgcgcaatatacaaactatgttagatggt
gctgtgttacaaatgcaacaatattcatctttagttgcatcaatgagaagtgtgccagtc
agcactccaagtcaaaataatgtgaaaaattccaatccttctacaaaaacagaaagtgga
ccaactatgaatggtcacatgagcagttctgagcactcttcacatgccaacacatcaagc
agcactgatcctgctgaagaattgcgccgccgccgcttagaatatctacagggaaatgct
agtgcggcagacagagacgataacagagagcagcacaattaa
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