Parasteatoda tepidariorum (common house spider): 107453961
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Entry
107453961 CDS
T06106
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm7
KO
K12626
U6 snRNA-associated Sm-like protein LSm7
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03018
RNA degradation
ptep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107453961
09123 Folding, sorting and degradation
03018 RNA degradation
107453961
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107453961
03041 Spliceosome [BR:
ptep03041
]
107453961
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
107453961
mRNA degradation factors
5'-3' decay
Lsm complex
107453961
Spliceosome [BR:
ptep03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
107453961
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
107453961
NCBI-ProteinID:
XP_015926502
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All DBs
Position
5:44971995..44981689
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AA seq
115 aa
AA seq
DB search
MYNQSGGGERGSAGADKEKKRKESIVDLSKYLEKPIRVKFQGGREASGILKGYDPLLNLV
LDNTTEYLRDPDDAYKLTDDRRSLGLVVCRGTAVVVICPTDGMESIPNPFISHDT
NT seq
348 nt
NT seq
+upstream
nt +downstream
nt
atgtataaccaatctggtggtggggagcgtggtagtgctggagctgacaaagaaaagaag
agaaaagaaagcattgttgatctttcaaaatatttagagaagcctatccgtgttaaattt
caaggtggacgagaagcatctggtatattgaagggatatgaccctctattgaatcttgta
ttagataatactacagaatatttaagagatcctgatgatgcttacaaattaactgatgat
cgacgatccctgggactagttgtttgtcgtggtacagctgttgttgttatctgtccaaca
gatggaatggaatctatacctaatccttttatatctcatgacacataa
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