KEGG   Parasteatoda tepidariorum (common house spider): 107454092
Entry
107454092         CDS       T06106                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
ptep  Parasteatoda tepidariorum (common house spider)
Pathway
ptep03030  DNA replication
ptep03410  Base excision repair
ptep03420  Nucleotide excision repair
ptep03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:ptep00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    107454092
   03410 Base excision repair
    107454092
   03420 Nucleotide excision repair
    107454092
   03430 Mismatch repair
    107454092
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:ptep03032]
    107454092
   03036 Chromosome and associated proteins [BR:ptep03036]
    107454092
   03400 DNA repair and recombination proteins [BR:ptep03400]
    107454092
DNA replication proteins [BR:ptep03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    107454092
  DNA Replication Termination Factors
   ELG1-RFC complex
    107454092
Chromosome and associated proteins [BR:ptep03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    107454092
DNA repair and recombination proteins [BR:ptep03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     107454092
  Check point factors
   HRAD17(Rad24)-RFC complex
    107454092
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA AAA_lid_RFC1 Rad17 AAA_11 AAA_22 RuvB_N AAA_16 Sigma54_activ_2 AAA_30 AAA_5 nSTAND3 MTC2_N DUF815 T4SS-DNA_transf
Other DBs
NCBI-GeneID: 107454092
NCBI-ProteinID: XP_015926635
LinkDB
Position
3:complement(87693481..87700878)
AA seq 356 aa
MGSLWVDKHRPKNLSQLDYHKEQAIHLKKLVNSGDFPHILLYGPPGAGKKTRVMCLLREL
YGAGVEKLKIEHQVFETPSRRKVEVITIASNYHIEVNPSDVGIYDRVVIQELLKTVAQTH
QLDSHTQKEFKVVVLMEVDKLTKDAQHALRRTMEKYMTTCRIVLCCNSSSKVIPAIRSRC
LGIRVGAPTINEISTILQNICRKECLSLPSELAQRIAEKSNRNLRRAILMCEACRVQQYP
FSGDQDIVEPDWEIFLRDTANFIVQEQSPKRLAEVRARIYELISHLIPTDIIFKGLLKEL
VNNCDGQLKGEVTQHAAFYEHRLQLGSKAIYHIEAFVAKFMALYKKFLEDNMADVY
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgggaagtctttgggttgacaaacatcgtccaaaaaatttatcgcaattagattatcat
aaagaacaagcaattcatttaaaaaaattagtaaatagtggtgattttccacacatttta
ctatatggaccacctggagctggtaagaaaacaagagttatgtgcctgttgcgggaactt
tatggagctggtgtagaaaaattaaaaatagaacatcaagtatttgaaactccttccagg
cggaaagttgaagtcataactattgcaagtaactaccacattgaagtcaatcccagtgat
gttggtatctatgatcgtgttgtcatccaagaacttttaaaaacagttgcccaaacacat
caacttgacagccatacacaaaaagagtttaaagttgttgtcttaatggaagttgataaa
ctaacaaaagatgctcagcatgcactcagaagaactatggaaaagtatatgacaacatgc
cgcatcgtcctatgttgtaactcaagtagtaaagttatacccgctatcagaagcagatgt
cttggtataagagttggagctcccactataaatgagatttcaaccatattacaaaatatt
tgccgaaaagagtgcctctcgttaccctctgaacttgctcaaagaattgctgagaaaagt
aaccggaatttgagaagagctattttaatgtgtgaggcttgtagagtccaacagtatcca
ttttcgggtgatcaagacattgtagaacctgattgggaaatttttcttagagatacagct
aatttcattgttcaagaacagagtcctaaaaggttagccgaagttcgtgcaaggatatat
gaacttatctctcatcttattccaactgatataatttttaagggtcttctgaaagaatta
gtgaacaactgtgatggacaattgaaaggtgaagtgacacaacatgcagccttttatgaa
caccgattgcaacttgggagtaaagctatttatcacattgaagcttttgtggccaagttt
atggctttgtacaaaaagtttttagaagacaatatggctgatgtgtattaa

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