Parasteatoda tepidariorum (common house spider): 107454743
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Entry
107454743 CDS
T06106
Name
(RefSeq) nucleoporin p54
KO
K14308
nuclear pore complex protein Nup54
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
107454743
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107454743
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
107454743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup54
Nup54_C
VirD1
Motif
Other DBs
NCBI-GeneID:
107454743
NCBI-ProteinID:
XP_042897959
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All DBs
Position
4:91235252..91249816
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AA seq
513 aa
AA seq
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MAFSFGNPVSSAPTFGAPSAFAFGNTTAPASSTGFSFGGPATTTAGTGFAFTSTPSTQPF
NFSGIGTATTTASSFGFGGFGAPTTTSSGFSFGQPTNTFGGGSGLFSTSLQPTNLTGLTA
QPTAVDNVTCLVTALNRPALFGDERDAIIAKWNLLQASWGTGKGYYFPNAAPVEFTPENP
FCCFKSVGYMCLPTAKPEDCIVGIVFNKKDQEIVAQQQQVIDTLHKCFGSKPTISVTVDG
IKALPDDRTEVTFYLLERMNTGLTRRVPPTEICSYMEQPTVKPQLTTIGIMCVAPKTAHS
KEQLQQYIENPPAGIEPIVWKQANLDNPDPGKLIPVPLIGFQELSRRMKFQEYETKQHQK
RLDIISDDIVELNRNHTTTVAKIAEHKRKLLELQHRVLKVLVHQEVSRKMGYSIQADEEQ
LRVKLEAIQAELSAPTQFKGHLKELTSQIRMQNQTSTFESERYSIDERAKEEIKEQLLSQ
QEGIALLIKIIKEDLWELNKIESMMNAENARRR
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggcttttagctttggaaatcctgttagttctgctccaacatttggtgcaccttcagcc
ttcgcttttggaaatactacggctccagcaagttcaactggtttttcttttggaggacct
gcaaccactactgcaggtacaggttttgcatttacttcaactccttctacacaaccattt
aatttctctggtattggaacagccacaacaactgcctcttcatttggatttggaggtttt
ggagctccaactacaacatcatcaggattctcttttgggcaaccaaccaatacatttgga
ggaggtagtggattattttctactagcttgcagcccacaaatttaactggtcttacagct
cagccaacagcagttgataatgtgacatgtcttgttactgccctcaatcgaccagcattg
tttggagatgaaagagatgccataatagccaaatggaaccttttgcaagcttcttgggga
acaggaaaaggctattattttcccaatgctgcacctgttgaattcacacctgaaaatcca
ttttgttgttttaaatctgtgggttacatgtgtttaccaactgccaaaccggaggattgt
atagttggcattgtgtttaacaaaaaagatcaagagatagtagctcaacagcagcaagtt
attgatacccttcacaagtgttttggcagtaaacctacaatatctgttactgttgatggt
attaaagctttaccagatgacagaacagaagtaaccttttatttgttagagaggatgaat
actggtctaaccagaagagttcctcctacagagatttgcagttacatggaacagccgact
gtaaagcctcaacttacaactattggaataatgtgcgttgctccaaaaactgcacacagt
aaagaacagttgcaacagtatattgaaaatcctccagctggaatcgaacctatagtatgg
aaacaagcaaatcttgataatccagatcctggcaaacttattcccgtaccgctaattggt
tttcaggagctctctcgtcgtatgaaatttcaagaatatgaaacgaaacaacatcaaaaa
agattggatattatatctgatgatatagtggaacttaatcgcaatcacactacaactgtt
gccaagattgctgaacataagcgaaaacttttggaattacagcatagagttttaaaagta
ttagtgcatcaagaagttagtagaaaaatgggatacagtattcaagcagatgaagaacaa
ctgcgagtaaaactggaagctattcaagcagaacttagtgctccaactcaatttaagggc
catttgaaggaattaacctctcaaataagaatgcagaatcagacatcaacgtttgaaagt
gaacgctatagtattgatgaaagagccaaggaagaaataaaagagcaactgctttcacag
caagaaggtattgcacttctaataaagataatcaaagaagatctgtgggaactgaacaaa
attgagtctatgatgaatgcagaaaatgctagaagaagatga
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