Parasteatoda tepidariorum (common house spider): 107455665
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Entry
107455665 CDS
T06106
Name
(RefSeq) THO complex subunit 3
KO
K12880
THO complex subunit 3
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03013
Nucleocytoplasmic transport
ptep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107455665
09122 Translation
03013 Nucleocytoplasmic transport
107455665
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107455665
03041 Spliceosome [BR:
ptep03041
]
107455665
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107455665
Spliceosome [BR:
ptep03041
]
Complex C
Other components
EJC/TREX
107455665
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107455665
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
Beta-prop_IFT122_1st
Beta-prop_WDR5
WD40_CDC20-Fz
Beta-prop_WDR3_1st
WD40
Beta-prop_EML_2
WD40_Prp19
WD40_WDHD1_1st
ANAPC4_WD40
WDR55
Beta-prop_CAF1B_HIR1
Beta-prop_WDR19_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_Aladin
Beta-prop_TEP1_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_WDR36-Utp21_1st
Beta-prop_NOL10_N
eIF2A
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_C
Beta-prop_EML
RMC1_N
DSE1_N
WD40_RFWD3
Beta-prop_HPS5
WD40_MABP1-WDR62_1st
PAC11
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_WDR35_TULP_N
WDR90_beta-prop_4th
Beta-prop_SPT8
Tricorn_2nd
CFAP251_N
Beta-prop_WDR75_1st
B-prop_COPA_B_2nd
Beta-prop_DCAF12
Beta-prop_WDR41
ASA1
KNTC1_N
Beta-prop_SCAP
Beta-prop_NUP159_NUP214
Beta-prop_VPS8
Beta-prop_ELP1_1st
WD40_like
PD40
Peptidase_S9_N
PROPPIN
Beta-prop_Nup120_160
Beta-prop_EIPR1
TRM82_WD
zf-MIZ
Beta-prop_IFT140_2nd
Motif
Other DBs
NCBI-GeneID:
107455665
NCBI-ProteinID:
XP_042909516
LinkDB
All DBs
Position
7:77275248..77290270
Genome browser
AA seq
321 aa
AA seq
DB search
MTNSYAETMRNYFASNSRIKEYQAHSSKVHSINWSCDGRRLASGSYDRTVSLFTLERDRL
CKEHTFKGHGDSVDQLCWHPSNPDLLATASLDKTVRIWDAKSQKSIATIQTKGENINICW
SPNGQTIAVGNKEDLVTFIDVKSHKILQDQQFKFEVNELSWNNDNNFFFLTNGQGCIYIL
SYPDLQIRQVLNAHPANCICIEFDKSGKYFATGSVDALVSLWDVETLVCIRTFSRLEWPV
RTISFSHDSCMLASASEDHLVDIADIATGERIAEVPCESPTFTVAWHPKKYLLAFACDDK
DKHMRERDAGTVKLFGLSSDM
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgactaattcctacgcagaaactatgcgcaattattttgcatcgaacagccgtatcaag
gaatatcaagctcattccagcaaagttcattcaattaattggagttgtgatggtcgtcga
ttagcatctggtagttatgatagaactgtttctcttttcactcttgagagagatcggttg
tgtaaagaacacacttttaaaggtcatggtgacagtgttgatcaattatgctggcatccg
tccaacccagatttgcttgctacggctagtcttgataaaactgtaagaatatgggacgcc
aaatctcaaaaatcgattgccacaattcagactaaaggtgaaaatattaatatttgctgg
tcacctaatggacaaactatagctgttggaaacaaagaagatttagtaacattcattgat
gtgaaatcccacaaaatacttcaagaccaacagtttaaatttgaagtaaatgaactttct
tggaataacgataataattttttcttcctcaccaatggacaaggttgcatctatattctt
tcgtatcctgatctacagattagacaagtattaaatgctcatccagctaactgtatttgt
attgaatttgataagagtggaaaatattttgctactggtagtgtggatgcccttgttagt
ttatgggatgtcgagactttggtttgcattcgtactttttctagacttgagtggcctgta
aggacaataagctttagtcatgatagttgtatgcttgcatcagcctctgaagaccattta
gttgacatagctgatattgcaactggggagcgtattgctgaggttccgtgtgaatcaccc
acattcactgttgcttggcacccaaaaaaatatctgctcgcttttgcatgtgatgataag
gataagcacatgagggaaagagatgccggaactgtcaaattatttggcttgtcatctgac
atgtaa
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