Parasteatoda tepidariorum (common house spider): 107455792
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Entry
107455792 CDS
T06106
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
107455792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ptep03021
]
107455792
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107455792
Transcription machinery [BR:
ptep03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
107455792
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
107455792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCHC
zf-CCCH_2
zf-CCCH_4
zf-CCHC_3
zf-C2H2_10
Nab2-like_zf-CCCH_
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
107455792
NCBI-ProteinID:
XP_015928991
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All DBs
Position
1:63317812..63321818
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AA seq
284 aa
AA seq
DB search
MEDIVAYSDNLRFDIEIALEQQLGALPLPFPGMDKSGSSICDFYLRGLCSKGPACPFRHV
KGDRTVVCKHWLRGLCKKGDQCEFLHEYDMSKMPECYFYSRFNACSNKECPFLHIDPEAK
IKDCPWYDRGFCRHGPNCRHRHTRRVICPNYVCGFCIEGPSCKFMHPKFDLPLQDPGSLP
KKTTITCHYCQEPGHKAISCPNLPIELRPGEEQQTNKAVMPSTQSQLVSVQLQDSLKTGY
RPIEQVTCFKCGEKGHYANKCPKGHLAFLSVALQSNPRPQLQQS
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atggaggatatagttgcttactccgataatttgcggttcgatatcgaaatcgctcttgag
caacaattaggagcattaccattgcccttccctggaatggacaaatctgggtcttcaatc
tgtgatttttatttacgaggtttatgtagcaaaggtccagcttgtccgtttcgtcatgtt
aaaggagaccgcactgttgtctgtaaacattggctcaggggtttatgcaaaaaaggtgat
cagtgcgagtttttacacgaatatgatatgagtaaaatgccggagtgttatttttattct
cgatttaatgcttgcagtaataaagaatgcccttttttgcacatcgatccagaggcgaaa
ataaaagactgtccttggtatgatcgaggtttttgtaggcatggtcctaactgccggcat
cgacatactcgtagagtcatttgtccaaattacgtttgcggcttctgtatagaaggacca
agttgtaaatttatgcatcctaaatttgatttgccgcttcaggatcctggatcgttgccc
aaaaagacaacaatcacctgtcattattgtcaagaacctggtcataaagctatttcttgc
cccaatttgcccattgaacttcgtccaggagaagaacaacaaactaataaagcagttatg
cctagtacacaatcacaattagttagtgtacagttgcaagatagtttaaaaactggatat
agaccaatagaacaagtaacttgttttaaatgtggtgagaaaggacattatgcgaacaaa
tgtcctaagggacatttagcatttcttagtgtggcattacaaagtaatcccagaccacaa
cttcaacaatcataa
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