Parasteatoda tepidariorum (common house spider): 107455975
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Entry
107455975 CDS
T06106
Name
(RefSeq) THO complex subunit 6 homolog
KO
K13175
THO complex subunit 6
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03013
Nucleocytoplasmic transport
ptep03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107455975
09122 Translation
03013 Nucleocytoplasmic transport
107455975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107455975
03041 Spliceosome [BR:
ptep03041
]
107455975
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
107455975
Spliceosome [BR:
ptep03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
107455975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR3_1st
WD40_WDHD1_1st
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR36-Utp21_2nd
WD40_CDC20-Fz
WDR55
Beta-prop_EML
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_LRRK2
ANAPC4_WD40
WD40_Gbeta
Beta-prop_NUP159_NUP214
Beta-prop_WDR36-Utp21_1st
Beta-prop_ACSF4
NBCH_WD40
Beta-prop_WDR41
Beta-prop_WDR75_1st
Beta-prop_SCAP
WDR90_beta-prop_4th
Motif
Other DBs
NCBI-GeneID:
107455975
NCBI-ProteinID:
XP_015929211
LinkDB
All DBs
Position
4:complement(52155172..52171134)
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AA seq
337 aa
AA seq
DB search
MEQLKQYYTNIYSVAYSSCGHYLVAGNTYGDIAIFNLSPYLEKDDSEQFEELHKYPYYKF
KAHDAPIYSIVSNKQLIISGGVAELKVWKWSDVKKKNAKSCWSFTIPQGDSLVKPEINAM
VLSKKDDNGLLYVGCGNSKLYCLDVEKQTLLFVLEGHTDSINCIDLGNSGQECVSGSEDG
SMRLWDARKGGNAIHVLEPYKHNLVNRPEQGKWIGCVGFDSSDDWLVCGGAPTLGVWHIR
SLAPSTRLEKPGILSYVALFHEDTIISGGSEPFINHWSLDGKLNIEVPSSSSNIFTIGVN
SSPTQQILASAGSNYKIDLCTDFRYKDVALYFCNNSE
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atggagcagcttaaacagtattatacaaatatttattctgttgcttattcttcatgtggg
cattatcttgttgctggtaatacatatggagacattgctatctttaatttatctccatac
ctggaaaaagatgattcagaacaatttgaagaattgcataaatatccttactataagttt
aaagctcatgatgccccaatatattctattgtctccaacaaacagttaatcataagtggt
ggagttgctgaattaaaagtctggaaatggtctgacgttaagaagaaaaatgctaagtca
tgttggagcttcacaataccacaaggtgatagcttggtgaagccagaaataaatgctatg
gtcctcagtaaaaaagatgataatggacttttatatgtaggttgtggaaacagtaaactt
tattgtcttgatgttgaaaaacaaacgttattgtttgttttagaaggacatacagatagc
ataaattgtatagatcttggaaacagtggtcaagaatgtgtatctgggagtgaagatggt
tcgatgagactttgggatgcaagaaaaggaggcaatgctattcatgtcctagaaccttac
aagcacaatcttgtgaatagacctgaacaaggaaaatggataggttgtgttggatttgat
tcttctgatgattggctggtgtgtggaggtgctccaactcttggtgtatggcatattcgt
tcacttgctccatcaactagactagaaaaacctggaatactttcatatgttgcacttttc
catgaagatactataatatctggtggctctgaaccatttatcaatcactggagtttagat
ggaaagcttaatattgaagtcccgtcttcgtcatcaaacatcttcaccattggagtaaat
tcgagtcctacacagcagattttagcatcagctggaagtaactacaagattgacctctgt
acagattttcgatataaagatgtagctttatatttttgtaataactctgaataa
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integrated database retrieval system
