Parasteatoda tepidariorum (common house spider): 107456799
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Entry
107456799 CDS
T06106
Name
(RefSeq) collagen alpha-1(XVIII) chain isoform X1
KO
K06823
collagen type XVIII alpha
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptep04147
]
107456799
00535 Proteoglycans [BR:
ptep00535
]
107456799
00536 Glycosaminoglycan binding proteins [BR:
ptep00536
]
107456799
Exosome [BR:
ptep04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
107456799
Proteoglycans [BR:
ptep00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
107456799
Glycosaminoglycan binding proteins [BR:
ptep00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107456799
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
107456799
NCBI-ProteinID:
XP_042904582
LinkDB
All DBs
Position
3:complement(16457106..16690579)
Genome browser
AA seq
1254 aa
AA seq
DB search
MRIFHQCLLLTLTFGIVTISAKRWRNKQNRPKAPKNATARAQPRVVDLLHAIQIPFASPG
INFEIGPDGFPAFRIEQEADIKAPYRLHLPPSLYRNFTIGATLRPSNSDGGFVFAVLNPT
ETVVQLGLRLMDAGNSTINISLYYTDVDMHLTSQTLITIQVPDFVGMWTRLAFRIAENNI
TLYFNCEEVSADVARRIPKRLVFDTASTLYIGQAGPLLGGHFAGGLQELKIYNRPSIAEI
YCDATFQGSGDGRGDVGIEEIDVNDDDRGVSPLPSPDLAEEGNLYPHRTCPPPLITPPPP
GPGHIGVEKVSGAKGQKGQSGRHGLPGKKGETGLITKDELLKLQPKLKGEKGDPGPPGLQ
GPVGPPGEKGECVFLPRSPSEIFNEGDYGSGDDQGSREWFSGVRHHGLPGGPCVCNISLK
HLDLPYDNLRGAKGEPGPPGLPGPPGIGLPGSVGPKGDQGEIGVPGSQGQKGEPGVDGIP
GSPGPRGMPGPPGPPGLANGIGTPFDQLEGAYGSGLYPSSGDGPFGPYVGRPGVPGVQGP
PGLPGPSGVRGERGYPGEKGDRGDIGPKGDKGNQGIPGFQGEKGDPGLDGRDGIAGLPGL
KGERGVKGDPGPAGIGLPGPPGPPGISAIYRPSDDDAVDLDYGSVRFTGPKGDRGDPGTP
GPPGEKGTKGDRGSRGKEGKEGKEGPVGSKGDLGPPGPPGITKIVDSVGDAISLLKGERG
RRGKKGKIGPPGPPGISGPVGEIGLPGFPGRPGNPGKQGPKGDTGIGIKGDKGEPGPPGY
GGYVDPDGISVVSIGPKGDRGDSGPVGPMGPHGRPGEKGETGRPGKDGVKGERGPPGPAG
GLGDESSGGIMHVNGPPGPPGPPGPPGKSVQGPPGLPGPPGAPGSTGYRNPYWTVNENPG
RRAYRGIKGIRSFARSKGVQVFPGPPGPPGPPGPPGSPGKSATESAPEELRRPTVVPGAV
TFKNMDTLLRMSDISPLGTLAFVLEEESLLVRVSEGWQYVALGSLVVQSTPSPTKPPTTH
APFSPPVDNLRLDKAPRLRMAALNQPFSGDMHGVRGADYECYRQSRRANLRGTFRAFLAS
RVQNLDSIVRFADYSLPVINLKGEVIFNAWKDIFTGAGGTFPYPPRIYSFDGRNVLTDNR
WAQKLVWHGSDKHGVRDLESYCDAWHSAGLGKVGMASSLLRGRLLDQERYSCNNSFIVLC
IEATSQDDYRKRKKREIDEDFSGSDDEDNQEMTWEEFLRKEEEESAAETNEIYV
NT seq
3765 nt
NT seq
+upstream
nt +downstream
nt
atgaggatcttccatcagtgcctactcttgacgttgacttttggaattgttacaatatct
gctaaaagatggcgcaacaaacagaatcgtccaaaagctccaaaaaatgctaccgcacgt
gctcaacctcgagtagtggatcttcttcacgccatccagattccattcgcttctcctggt
atcaatttcgagattggccccgatggttttcctgctttccgcatagagcaagaagctgac
attaaagctccctacaggcttcaccttcctccctccctatacagaaattttactatcggt
gcaactttgcggcctagtaactctgatggaggttttgtatttgcagtgctcaacccaaca
gagacagtagtgcaactcggcctgagactgatggatgctggcaactccacaataaacatt
tctctgtactatactgacgtggacatgcacctcacctcacaaacccttatcaccatccag
gttcctgattttgttggaatgtggacaagattagctttccggatagcagaaaacaacatt
accttatattttaattgcgaagaagtatcagctgatgttgcaagaagaatacccaagaga
ttggtgtttgatacagcttctactttgtatatcggacaagctggacctttattaggagga
cattttgcgggtggactgcaagaactgaaaatatataatcggcctagtatagctgaaatt
tattgtgatgctacattccagggaagtggtgatggaagaggtgacgttgggattgaagaa
attgatgtaaatgatgatgatcgaggagtttcccctcttccttcacctgacctagccgag
gaaggtaacttatatcctcatagaacttgtccacccccattgattacgcctccgccaccc
ggtccagggcatataggcgtcgaaaaagtttctggagcaaaaggacaaaaaggtcaatca
ggcaggcatgggctaccaggaaaaaagggtgaaacaggtcttataacgaaagatgagtta
ctaaagctgcaaccaaaattaaaaggagagaaaggtgatcctggaccacctggattacaa
ggacccgtaggacctccgggagaaaagggagagtgtgtctttttgccacgtagtccttca
gaaatattcaatgaaggagattatggatcaggagatgatcagggctctcgggagtggttt
tcgggtgttcgtcatcacggtttacctggtggaccttgcgtgtgtaatatttctttaaaa
catttagacctaccttatgataatctcagaggagcgaaaggagaaccgggaccaccagga
ctaccaggacctccgggcataggtttgccaggatctgttggaccgaagggggatcaagga
gaaattggtgtaccgggatctcaaggacaaaaaggagaacccggtgttgatgggatacca
gggagtcctgggcccaggggaatgcctggaccgcctggcccacctggcttggccaatgga
attggtactccttttgatcagctagaaggtgcctatggttcaggtttatatcctagctct
ggagatggaccttttggtccgtacgtgggaagacctggtgtaccaggagtgcaaggtcca
cctggtttacctggaccatcaggggttcgaggagaacgaggttacccgggcgaaaagggt
gatcgtggagacataggtcctaaaggtgataagggcaatcagggaattccaggatttcaa
ggagaaaaaggagatcctggattggatgggagagatggaatagctggtttacctggtttg
aaaggcgaacgtggtgtaaaaggtgatcctggacctgctggtataggactcccaggacca
cccggaccacctggtatctctgctatataccgcccttcagacgatgatgctgtcgacttg
gattacggcagtgtacgtttcactggcccaaagggcgacagaggagatcctggtacacca
ggcccaccaggagaaaaaggaacaaagggtgatagaggatcgcgtggaaaagaaggtaaa
gaaggcaaagaaggaccagtaggttcaaaaggtgacttaggtccacctggtcccccagga
ataaccaaaatagtggattcagtcggagacgctatttcattgctgaaaggtgaacgagga
aggagaggtaaaaaaggaaaaattggaccaccagggccacccggaatatccggacctgtt
ggtgaaatcggtttgcccggttttccgggtaggcctggaaacccaggaaagcaaggaccg
aaaggagatacaggaataggcataaaaggagataaaggagaacctggaccacctggttat
ggtggttacgtagatccggacggtataagtgttgttagtataggcccaaaaggagataga
ggagactcgggcccagtaggacccatggggccacatggacgacctggagaaaaaggagaa
acgggaagacctggaaaagacggcgttaaaggtgaacgaggaccaccaggtccagctggc
ggattgggagatgaaagcagtggaggaattatgcatgtcaatggaccacctggtcctcca
ggtcccccaggcccaccaggtaaatccgttcaaggaccacctggtctaccaggtcctcca
ggggcccccggcagcactggatatcgcaacccatactggactgtgaatgaaaacccagga
agaagagcatacagaggaattaaaggtataagatcatttgccagatcaaaaggagtacaa
gttttcccaggtccaccaggacctcccggcccaccagggccccctggctctccagggaaa
tctgcgactgaatcagcacctgaagaactcaggagacctacagttgttcctggggcggtt
acatttaaaaacatggatacgttgctacgtatgtctgatatcagtcctcttggaacattg
gcatttgttttggaagaagaatcgctacttgtaagagtaagcgaaggatggcagtatgta
gcgctgggatcattggtagtccagtctactcctagtccaactaaacccccaactacccat
gctccatttagtccaccagtagataacctccgactagataaagcacctcgtttacgaatg
gcagcccttaaccaaccattttctggagatatgcatggagtcagaggagcagattacgaa
tgttatcgacaatctaggagagccaacttacggggtactttccgagcattcctagcatcc
agggttcagaacctcgatagcattgtacgcttcgcagactacagccttccagtcatcaac
ctcaagggtgaagtgatatttaatgcctggaaagacattttcactggtgcaggaggaaca
tttccttatccacctcgcatttactcctttgatggtagaaatgttttaactgataacagg
tgggctcaaaaactggtgtggcatggttctgacaagcatggagttcgggacttagaatca
tattgcgatgcttggcattctgcaggcttaggcaaagttggaatggcaagctctctccta
cgggggcgtctcctcgaccaagaacgctattcttgcaacaactctttcatcgtcctgtgc
attgaggccaccagtcaagatgactatcgaaaacggaaaaaacgtgaaatcgatgaagac
ttttctggttccgacgatgaggataatcaagaaatgacgtgggaggaattcctcaggaaa
gaagaagaggaaagtgcagcagaaacaaacgagatttatgtataa
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integrated database retrieval system
