Parasteatoda tepidariorum (common house spider): 107456992
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Entry
107456992 CDS
T06106
Name
(RefSeq) zinc finger SWIM domain-containing protein 8 homolog isoform X1
KO
K25207
zinc finger SWIM domain-containing protein 8
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
ptep04121
]
107456992
Ubiquitin system [BR:
ptep04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul2 complex
Target recognizing subunit
107456992
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ZSWIM4-8_C
Motif
Other DBs
NCBI-GeneID:
107456992
NCBI-ProteinID:
XP_042903792
LinkDB
All DBs
Position
8:51301939..51361275
Genome browser
AA seq
1860 aa
AA seq
DB search
MFDWDEGDRFSFEDSDRFEEDSLCSWISEPESSCNNWRGWKKQNGNSSGTYHLLHSKLKD
VSSVQNALQVRSSEDSSSALPGTLIGQQSSHVNGSDGQLMSLVELSARVVAFHIPFEVVE
HVCPPVPEQLQLRIAFWSFPENEEDIRLYSCLANGSADEFQRGEHLYKARAVKELLQIGF
HLSATITPPQSLSVPKGTCNVAVTFDRCRITSCTCTCVSSASWCSHVVAVCLSRIHQPNH
VRLRAPVSESLSRLHRVQLQKFAQYLISELPQQILPTAQRLLDELLSSQQTAINTLGGAP
DPTAGASINEQTTWCLDGSTLHDNIRKILIKLCVPSPIVFSDVNYLSSTAPPAAAEWSSL
LRPLRGREPEGLWNLLSIVREMFHRSDRNAIPLLEIITDEMLQCDQILSWWFSTKVSLHT
GSGSHGGRGNMHSNTHASQHACSSLCDEVVILWRLAALNPALSPQDRQTLFGQLRCWHVK
TLERVWKTRSSTNNNSSSTIKRADIEVFPGFRPAMEGCLLDWSDYPIPGVTYAEGGGRRW
YCPYVHVRTNETPSSAVATGNDSDNATLACFSARRGRSVDVGQITGLCPCDKQSSDKKTI
CVLNFHHDQPPEHKLGSNRSSLSSEGFCENEQEVLADALNESCCINVARGSDTIRSSGIA
TKMMISSDLWNSEESLQDESDGAKGSSSDAFKISIQPSTSKGVGSKTGLDKDKNSNVKPL
EAVPSSSQQLNGHVPPLRQAECSGEASESQQSSDEYHLYYYDPRVRLQSPDHNQQYVVEE
QWFSVAVKKIEDSLEVLFARAEALHAHGHSHEACMLAVRLAEELLASPPNLAVEVPATTC
RGKKVRRFNPASHQVSLMASATLAKVAFLCSVLGENHEYHHLAFRVGLFGLEMTRPPAST
KALEVKLANQEQDLVLLLKRLPLLDREMSMLRERAEQLRDGKLVSRGEALLPLMLASFIF
DALTLSSSVNRGIPLLYNKLPGDEHLGFEAAVAALGLKANVSEAEHPLLCEGTRRQRGDL
AITLLVTYKDDQEKLAKIMEKLLDKEVHQMYKAPASSVYYSSPASSQQSNGSSTVPDEKS
VNDDGITKDTDETDLHDETENGHNDPHRDSDRQNPVVRPRSLPSAQNSTPGTSRMRDMRQ
SHRTGEDNGEHSEGASSPGWEEDYKAWEAKFRCTNFRTTKKHSGGMASIDSSAPETTSSD
NSPTVVRRSTWLKQCGPGSDSGSSGESSDSFASSSSEDKAPRSKSREGESLPIMIHGTRL
PTTFPSPENNVRSNTPNIKNTRFKGKRAYPSVPNQPSEASAHFMFELAKTVLTKAGGNSS
TAVLFTQPSASQNHRGPHRALHMCAFQIGLYALGLHNAVSPNWLSRTYSSHVSWITGEAM
EIGSTAINFLIETWEGHLTPPEVASLADRASRGRDPRMVRAAAELALSCLPHAHALNPNE
IQRALIQCKEQSSEMLERACLAVESAAKGGGVYPEVLFDVARRWYELYEESLDDHPSNQS
ERHSNSEIISHDILSLPPPPPTCDHTVVSSHNIHLSQVEGVITTVPSVQVLPPLTCPPVS
YTLAYPTAAYGYMPFSHSHVPIHPAYVPSPASYPYPPLANLSYYPPTVANTTHIRHPATG
MYPGQVVGTAVTRASVTQTTPVLTMNGHPVVTQPPPPSIPPPQQTQIHGPLPQLNQRQMG
YLLAAYRVGMLAMETLARRVHDDRPQAKYARNPPYGEDVKWLLGIAKKLGTSYLQDFCIC
TVNSVASPFILHEIVVEAAQYLARSASPPLPQPLRSHLLTPLIQKCQQMFTACTHFKMYH
ITPAEYDEFVSIIRSARTAFQLTPGGIVQFNELLQSLRRTKSCKKELWQRIANTLATPTI
NT seq
5583 nt
NT seq
+upstream
nt +downstream
nt
atgtttgattgggatgaaggagatagattctcatttgaagacagtgatcggttcgaagaa
gactccttgtgctcatggattagcgagccagagagttcatgcaacaactggcgtggctgg
aagaaacagaacggcaacagttctgggacttatcatttgttacattcaaagctaaaagat
gtatcttctgttcaaaatgctcttcaggttcgatcttctgaagatagcagttctgctctg
cctggtactcttattgggcagcagtcttctcacgtaaatggctctgatggacagctcatg
tcactcgtagaactttctgctagagttgtagcttttcacatcccatttgaagtggtggaa
catgtctgcccacctgttccagaacagttacagctacgtattgctttttggagctttcct
gaaaatgaagaagacattagattatattcatgcttagctaatggctcagcagatgaattt
cagagaggggaacacttatacaaagcaagagctgttaaagaacttttgcaaatagggttc
catctcagtgctactatcacccctccccagtctctatcagtccctaaaggtacctgtaat
gtagcagttacttttgatcgctgccgtattacatcgtgcacttgtacttgtgtcagtagc
gcatcttggtgttctcatgttgttgctgtgtgtttgtccagaattcatcaacctaatcat
gttcgcctgcgagcacctgtgtcagagtctttatctcgtctacaccgcgttcagcttcaa
aaatttgctcagtatttaatcagtgaactaccacaacagattttaccaacggctcagcgc
ttactagatgagttgctatcaagtcaacagactgcaatcaatactctaggaggtgcacca
gatccaactgctggagcttcaattaatgaacagaccacttggtgtctggatggctcaact
cttcatgacaatatcagaaaaattctcatcaagctatgtgttccatcacccatcgtcttt
agtgatgtaaattatctgtcatcaactgctcctcctgctgctgcagaatggtccagtcta
ttgagacctttgaggggaagagaacctgaggggttatggaatttactctctattgttaga
gaaatgttccaccgcagcgacagaaatgctatccctttgctggagattatcacagatgaa
atgttgcaatgtgaccagatattgtcttggtggttcagtactaaagtttctctccatact
ggatctggtagtcatggtggtcgtggaaatatgcacagtaacacacatgcatctcagcat
gcatgtagtagtttatgtgatgaagtggttatattgtggaggttagcagctttaaatcct
gccctatctccgcaagatcgacaaaccttgtttggtcaattgcgatgctggcatgttaag
actttggaaagagtgtggaaaactcgcagcagtacaaataacaacagcagcagcaccatc
aaaagagccgacatcgaagttttccctggttttcggccggcaatggaaggttgcttgtta
gattggagcgattatcccataccaggtgtaacatacgccgaaggaggtggccgacgttgg
tactgcccgtacgttcatgtaagaactaatgaaacccctagttctgctgttgctactgga
aatgacagtgacaatgccactttagcttgcttctctgccagaagaggtcgctctgttgat
gttggccaaataactggcctctgcccttgtgataaacaatcgtcagataaaaaaaccatt
tgtgtactcaattttcatcacgatcaaccacctgagcacaaacttggtagtaaccgcagc
tctttgagcagtgagggcttttgcgagaatgagcaagaggtgttggcagatgctctgaac
gaatcatgctgcataaatgtggcccgtggaagcgatactattaggagttccggcattgca
acaaaaatgatgatttctagtgatttgtggaattcggaagaaagccttcaggatgaatct
gatggggctaaaggttcctcgtcggatgcattcaaaatcagtattcagccttctaccagc
aagggtgtcggctctaaaactgggttagataaagataaaaactcaaatgttaagccattg
gaggctgtaccatcttcatctcaacaactcaatggtcatgtccctcccttaagacaagct
gagtgcagcggtgaagctagtgaatcccaacaatccagtgatgaatatcatttatattat
tatgatcccagagttagacttcaaagccctgaccataaccaacaatatgttgttgaagaa
cagtggttttctgttgctgtgaagaaaattgaagactccttagaagttctatttgctcga
gctgaagctctccatgcacatggtcattctcatgaagcttgcatgcttgctgttcgctta
gctgaagaattgctggcgagtccaccaaatttagctgttgaagtgcctgcaacaacatgt
cgaggcaaaaaagttcgccgctttaatccagccagtcatcaagttagtttaatggcctct
gcaacccttgcaaaggttgcctttttgtgttctgtgctcggagaaaatcatgaatatcac
catcttgccttccgtgttggattatttgggttagaaatgacaagacctcctgcatctacc
aaagctttagaggtgaaattggccaaccaagaacaagacttggtgctgcttcttaaacga
ctcccattattggatagagaaatgagcatgctaagagaaagagctgaacaattgcgtgat
ggaaagttagtttcaaggggagaagctctattacctttgatgcttgcaagtttcatcttt
gatgctctaactttatcaagctctgttaatcgtggaatccctcttttatacaataaatta
cctggagacgaacatttaggatttgaagcagcagttgctgccttaggactaaaagctaat
gtatctgaagctgaacatccacttttatgtgaaggcactcgacgacaacgaggagatcta
gctataacactgttggtcacttataaggatgaccaggaaaaattagctaaaatcatggaa
aaactgctggataaggaagtacatcaaatgtacaaggcaccagcctcttcagtttattat
tcttctcctgcaagttcacagcaaagtaatggctcaagcacagtgcctgatgagaaaagt
gttaacgatgatgggataactaaagatacagatgagacagatttacatgacgaaacagaa
aatggtcataatgaccctcatagagactcagatcgtcaaaacccagtggtacgtcctcga
agcttgccttctgctcaaaactcaacccctggaactagtcgaatgagggacatgagacaa
tcacatcgaactggtgaagacaatggtgagcatagtgaaggagcatctagtccaggctgg
gaagaggattataaagcctgggaagcaaaatttcgttgcacaaatttccgtactactaaa
aagcattctggaggaatggcaagtattgatagtagtgctcctgaaacaacatccagcgat
aactcacctactgtcgtaagacgtagtacatggctaaagcaatgtggacctggaagtgat
agtggtagtagtggcgagagtagcgattcatttgcctccagttcatctgaagataaagct
ccccgatctaaatcccgagaaggagaaagcctcccaattatgattcacggtactagattg
cctacaacatttccttcaccagaaaataatgttcgatccaatactcctaatatcaagaat
accagatttaagggaaaacgggcctatcctagtgtccctaatcagccaagtgaggcatct
gctcatttcatgtttgaacttgcaaaaacagtcctcacaaaagctggtggtaacagttca
acagctgttcttttcacccagccgtcagcaagccagaatcacagaggacctcacagagca
ttgcacatgtgtgcctttcaaattggattgtatgctttaggtcttcacaatgctgtttct
ccaaactggttatctcgtacatattcttcacatgtttcctggataacaggtgaagcaatg
gaaattggcagcacagccattaatttcctcattgaaacttgggaaggccatcttactccc
ccagaagtggcatcactcgccgatcgagcttctcgaggaagagatcccagaatggtgcgt
gcagctgctgagttagctttgtcttgcttgccacatgctcatgctttgaatcccaatgaa
atacagcgagcattaatccagtgcaaagaacaaagtagtgaaatgcttgaaagagcttgt
cttgctgtggaatcggctgcaaagggtggtggagtttatcctgaagtactttttgatgtt
gcaagaagatggtatgaactgtatgaggagagcttagacgatcatcccagtaatcaatcg
gaaaggcattcaaactcagaaatcatctctcatgatattttatctttacctccgccgcca
cccacatgtgatcacactgttgtctcttctcacaacatccatttgagtcaagttgaagga
gtcatcacaactgtaccatctgttcaagttctcccaccattaacttgcccccctgtgtca
tacacattagcctatcccacggctgcatacggatacatgccattttcacactctcatgtg
cccatacatcctgcatatgtcccttctccagcatcttatccctatccaccattagcaaac
ttatcctattacccacccactgttgctaatacaactcatattcgtcatcccgctacgggt
atgtacccaggacaggttgttggtactgctgtgactagagcttcggtaactcagacgact
ccggttcttaccatgaatggccatccagttgttactcagcctcctcctccatctatacca
cctcctcagcagacacagattcatgggccacttcctcaattaaaccagagacaaatggga
tatttgttagctgcttatcgagtgggtatgcttgctatggagactttagcacgtcgtgtt
catgatgacagaccccaagccaagtatgctcggaacccaccctatggagaggatgtaaaa
tggcttctgggtattgctaaaaaattaggaacatcatatttacaagatttttgtatttgc
accgtaaacagtgttgccagtccattcatattgcatgagattgtagtggaagctgcacaa
tatttagctcgctcagcatcaccgcctcttcctcaaccattgcgttcacatcttctcact
ccactgatacaaaagtgtcaacaaatgttcacagcttgtacacatttcaaaatgtatcac
attactccagctgaatacgatgagtttgtcagcatcatccgcagtgcaagaactgcattt
cagcttacaccaggagggattgtacaattcaatgaacttcttcagagcttgaggcgcacc
aaatcctgcaaaaaggagttgtggcaaagaattgcgaacacactggctacgccaaccatt
tga
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integrated database retrieval system
