Parasteatoda tepidariorum (common house spider): 107457333
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Entry
107457333 CDS
T06106
Name
(RefSeq) ATP-dependent RNA helicase DDX55
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ptep03009
]
107457333
Enzymes [BR:
ptep01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107457333
Ribosome biogenesis [BR:
ptep03009
]
Eukaryotic type
Pre-60S particles
Helicases
107457333
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
Helicase_C_2
DUF2031
Motif
Other DBs
NCBI-GeneID:
107457333
NCBI-ProteinID:
XP_015930964
LinkDB
All DBs
Position
Unknown
AA seq
569 aa
AA seq
DB search
METKSWNDYKLSPGVLSGIEKLGFKYLTPVQAASIPLFLKKKDVAVEAVTGSGKTLAFLV
PMFEILLEKAPFRKLDVAAIILSPTRELAVQISDIVSIFLEELPQFTSMLLIGGGSVNTD
IRQLSEKGANIIIATPGRFADLFSHHHKSLRLAAFVKALEILILDEADKLLEMGFEKAIN
TILSYLPKQRQTGLFSATQTKEMEDLIRAGLRNPVCISVKEKSSLSHDQRTPSTLSNFYM
VCDPEKKFSVLVSFLRSMQSVKCMLFFSTCASVDYFTYLLKEFIKHIPVISIHGRMRKKR
HKIFSDFRNYESGILLCTDVLARGVDIPDVHWVIQFDPPSSASSFVHRCGRTARIGKTGN
ALLMLLPNEETFVNFLDVNQKVTLLPMDPPEFTDVSPNIKKISCKNREIYEKGLKAFVSF
IRFYTKHECNLLFRVKDLDLGKLANGFALLKLPKMPELKKKEITNFVATEVNYEEIPYSD
TSREKQRKIRVQQLKDHPELRKKMSAKREEKLKMKKLLTKKSAKKRKKKYVDDDADLEEL
ARDARLCKKFKKGKISKEEFDAEFAADED
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaaaccaaatcttggaatgattacaaacttagcccaggtgtcttgtcaggcatagaa
aaacttggttttaaatatttaactcctgtgcaagctgcttctattccattatttttgaag
aagaaggatgttgctgttgaagcggtaacgggaagtggaaagacgttagcctttcttgtg
cctatgtttgaaattttattagaaaaagcaccgttccgaaaacttgatgttgctgccatc
attctttcgcctacacgtgagttggcagttcagatctctgacattgtcagcatttttcta
gaagaattgcctcaatttacaagcatgcttttgattggaggtgggtctgttaacacagac
atcagacagttgtcagaaaaaggagcaaacatcataattgccactcctggtagatttgct
gacctcttcagccaccaccataaaagcctaaggcttgctgcatttgttaaagctttggaa
attctgattctagatgaggcagacaaattacttgaaatgggttttgaaaaagcaatcaat
acaatattaagctatcttccaaaacagaggcaaactggtttgttttctgccacacaaact
aaggaaatggaggacctcattagagcaggtttgagaaatcctgtctgcatctctgttaaa
gaaaagagttccctgagtcatgatcagaggacgccttctaccctttcaaacttttatatg
gtgtgtgatcccgagaaaaaattcagtgttttagtctctttccttcgttccatgcagagt
gtcaagtgcatgctgttcttcagtacatgtgcatcagtggattatttcacttatctcctg
aaagaattcatcaagcatatacccgttatcagcattcatggtcgtatgaggaaaaaaaga
cataaaattttttcagattttcgcaattatgagagtggtatattgctgtgcacggatgtt
ttagctcgaggtgtggacatacccgatgttcactgggtgattcagttcgatccaccaagt
tctgcgagctctttcgttcatcgatgtggtcggacagcacgcatagggaaaactggaaat
gctttacttatgttgttaccaaatgaagagacatttgttaactttttagatgtgaatcaa
aaagtcactctcttgccgatggacccacctgaatttactgatgtctcaccaaatataaag
aaaatatcctgtaaaaatagagaaatctatgagaaaggattgaaagcatttgtttctttt
attcggttttacacgaaacacgaatgcaatttgcttttccgtgtgaaagacttagatttg
ggaaaattagccaatggttttgctttactgaagttaccaaaaatgcctgagctaaaaaag
aaagagatcacaaactttgttgccactgaagtaaattatgaagaaattccttacagtgat
acaagtagagaaaagcagagaaaaataagagtgcaacagttgaaggaccatcctgaatta
agaaaaaaaatgtctgccaaaagggaagaaaaacttaaaatgaagaaattgctaactaag
aaatctgctaagaaaagaaagaagaaatatgtggatgatgatgctgatcttgaagaatta
gctagagatgctagactttgtaaaaaattcaaaaaaggaaagatatcaaaagaagagttt
gatgcagaatttgcagctgatgaagattga
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