Parasteatoda tepidariorum (common house spider): 107457450
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Entry
107457450 CDS
T06106
Name
(RefSeq) uncharacterized protein
KO
K12586
exosome complex component RRP43
Organism
ptep
Parasteatoda tepidariorum (common house spider)
Pathway
ptep03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ptep00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
107457450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptep03019
]
107457450
Messenger RNA biogenesis [BR:
ptep03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
107457450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
107457450
NCBI-ProteinID:
XP_015931096
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All DBs
Position
2:59852038..59868220
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AA seq
545 aa
AA seq
DB search
MGRDNRRVAPPDNCMSPNFFKSSKKQESIVNEKGERRDGRKPDDIRPMSLKVGLIPTVTG
SAYLECGNTKVICSVIGPRDVLTKSDSATKGQLSCEFKYNMFSCRERQPYVPSDEEMATA
KAIQDALEPVILLHKFPKSRLDITIYVLQDDGGAAGAAITCAGAALSNAGVEMYDLPVGC
TLIYCNSQFLIDPTAEEENYSEVKDFTKISMAMMVEYQSQVIYMDSSGYVNPSLLTESLK
MLQSSCHQVVTAVKLCLKKHVKEMNEELQDELNKGSVDRKGILQAKLLQPQTYLKTFLEN
NIREDSRNLPEFRAVLIDVGTIDTANGSALVRLGSTAVLCGIKAELTNPLPAHPDKGFFV
PNVTLTPICSNRFVPGPPTEQAQVYSQMIMDLWKNSLFIDPAKLCIVPKNLAWCVFADIM
CLSYDGNIFDACVLALMSALRNTKLPEVSVNDETSKIEVTDNFVDLNVDSFVSSATFAVF
NESVVADPSLEEESLSNSSVTVILNPNLEMSIHSDGPITEKVLDHCIDSAKERYSEMKEL
IENLS
NT seq
1638 nt
NT seq
+upstream
nt +downstream
nt
atgggtagagataatcgtcgtgttgctcctccagacaattgtatgtcaccaaatttcttt
aaaagtagtaaaaaacaagaaagcattgtaaatgagaaaggagagagaagagatggaagg
aaaccagatgacattaggccaatgtccctaaaagttggtcttatacctactgtcactgga
tctgcttatcttgaatgtggcaatacgaaagttatctgttcagttattggtcctcgtgat
gttttgaccaaaagtgattctgcgacgaaaggccaacttagctgtgaatttaagtacaat
atgttttcttgtagagaacgtcagccatatgttccatctgatgaagaaatggctacagct
aaagcaattcaagatgcattagagcctgtaattttacttcataaatttcccaagtcacgt
ctggatattactatttatgtattgcaagatgatgggggagctgccggtgctgctataaca
tgtgctggagctgctttatctaatgctggggttgaaatgtatgatttgcctgttgggtgt
actttgatatactgtaattctcaatttttaattgatccaactgctgaagaagaaaattac
tctgaagttaaagattttacaaaaattagtatggcaatgatggtagaatatcagagtcaa
gttatatatatggatagcagtggatatgtaaatccttctcttttgactgagagcttgaag
atgcttcaatcttcatgccatcaagttgttacagctgtgaaattgtgtttaaaaaagcat
gttaaagaaatgaatgaagaattgcaagatgaattaaataaagggagtgtagatagaaag
ggaattttacaagcaaaacttctgcagcctcagacatatttaaaaacttttcttgaaaac
aatattcgagaagattcaagaaatttacctgaatttagagcggtgttgatagatgttggg
actattgatacagcaaatggttctgctcttgtgaggcttggcagcacagctgttttgtgt
ggcattaaagctgaattaaccaatccccttcctgctcatcccgataagggattctttgtt
ccgaatgttaccttaactcccatttgctccaatcgttttgtacctggacctccaacagag
caagctcaagtatactcccaaatgattatggacttgtggaaaaattcacttttcatagat
cctgcaaaattgtgcattgttccaaaaaatttagcatggtgtgtgtttgcagacatcatg
tgtctcagttacgatggtaacatttttgatgcttgcgtattggctctgatgtccgctctc
agaaacacaaaactaccagaagtatctgtgaatgacgaaaccagtaagattgaagtaacg
gataattttgttgacttaaatgtggactcttttgtatcctctgctacctttgctgtcttt
aatgaaagtgtagttgctgatccttctttggaagaagagtctttgtctaatagctcagtc
acagtgattctcaatccaaatcttgaaatgagtattcattccgatggtcctataactgaa
aaggttttagaccattgtattgactctgcgaaggaaagatattctgaaatgaaggaactg
attgaaaatttaagctag
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