Paraburkholderia terrae: C2L65_08510
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Entry
C2L65_08510 CDS
T05318
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
pter
Paraburkholderia terrae
Brite
KEGG Orthology (KO) [BR:
pter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pter03009
]
C2L65_08510
Enzymes [BR:
pter01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
C2L65_08510
Ribosome biogenesis [BR:
pter03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
C2L65_08510
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
RrnaAD
Methyltransf_23
Methyltrans_SAM
TRM5-TYW2_MTfase
TRAM
Cons_hypoth95
MTS
Methyltransf_15
Methyltransf_11
PCMT
Methyltransf_32
Methyltr_RsmB-F
Motif
Other DBs
NCBI-ProteinID:
AUT61152
UniProt:
A0A2I8EP30
LinkDB
All DBs
Position
1:complement(1908309..1909733)
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AA seq
474 aa
AA seq
DB search
MSETVPHIGKTRSSRKSKQAREDAAAGPFKAPELDIDSLDMEARGVGRTVTEDGSPGKVI
FVEGALPGERVTYSSYRKKPSFEQAQVVDILKESVIRTRPQCKFFGICGGCSMQHLDVRA
QIAVKQRVLEDNLMHLSKLRPETVFRPIHGPSWGYRYRARLTVRNVAKKGGVLVGFHEKK
SSYVADMTSCEVLPPHVSDMLVPLRHMVEALSIRDRMPQIELAVGSSVTALVLRVLEPIN
EADEQVLRDFADQHNVQFWLQPKGPDSVYPFYPLDAQLDYTLPEYGIRMPFRPTDFTQVN
HQINRVLVGRALRLLAPAKTDRVLDLFCGIGNFTLPLARISREVVGIEGSEVLTSRALDN
AKENGVDSHTSFASRNLFEVTADDIRALGHFDKYLIDPPREGALAVSKALADIAQSGEGP
LPKRIVYVSCNPATLARDAGLLVHEAGYRLKGAGVVNMFPHTSHVESIALFERD
NT seq
1425 nt
NT seq
+upstream
nt +downstream
nt
gtgtccgaaactgtcccccacattggtaaaacgcgctcgtccagaaagagcaagcaggcg
cgcgaagacgctgccgctggtcccttcaaggcgcccgaactcgatatcgattcgctcgac
atggaagcgcgcggcgtcggccgcaccgtcacggaagacggctcgcccggcaaggtgatc
ttcgtcgagggcgcgctgcccggcgaacgcgtcacctattcgagctaccggaagaagccg
agtttcgaacaggcgcaggtcgtcgatatccttaaagagagcgtgatccgtacccgcccg
cagtgcaagttttttggcatctgcggcggttgttcgatgcagcatctcgacgtacgcgcg
cagatcgccgtcaagcagcgcgtgctcgaagacaatctgatgcatctgtcgaagctgcgc
ccggaaaccgtgttccggccgatccacggcccgtcgtggggctaccgctatcgcgcgcgt
ttgactgtgcgcaacgtcgcgaagaagggcggcgtgctggtcggtttccacgaaaagaag
agcagctacgtcgccgatatgacgagctgtgaagtgctgccgccgcatgtgtccgacatg
ctggtgccgctgcggcacatggtcgaagcgctgtcgattcgcgaccgcatgccgcagatc
gaactggccgtcggctcgtcggtgacggcgctcgtgctgcgcgttctggagccgatcaac
gaagccgacgaacaggtgctgcgcgatttcgccgatcagcacaacgtccagttctggctg
cagccgaagggtccggactcggtctatccgttctatccgctcgatgcgcagctcgactac
acgctgcccgaatacggcatccgcatgccgttccgcccgaccgacttcacgcaggtcaac
catcagatcaaccgtgtgctggtcggccgcgcgctgcgcctgctggcgcccgcgaagacc
gaccgcgtgctcgatctgttctgcggcatcggcaacttcacgctgccgctcgcgcggatc
tcgcgggaagtggtcggtatcgaaggcagcgaggtgctgacctcgcgcgcgctcgacaac
gcgaaggaaaacggcgtcgacagccatacgtcgttcgcgagccgtaacctgttcgaagtc
accgccgacgacatccgcgcgctcggccacttcgacaagtacctgatcgatccgccgcgc
gaaggcgcgctcgcggtgtcgaaggcgctggcggatattgcgcagagcggcgaagggccg
ttgccgaagcgcatcgtctacgtgtcgtgcaacccggcgacgctcgcgcgtgacgcgggc
ctgctcgttcatgaagcgggctaccggttgaagggtgcgggcgtggtgaacatgttcccg
catacgtcgcacgtcgagtcgattgcgctcttcgagcgcgactga
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