Paraburkholderia terrae: C2L65_09475
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Entry
C2L65_09475 CDS
T05318
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
pter
Paraburkholderia terrae
Pathway
pter03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pter00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
C2L65_09475 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pter03400
]
C2L65_09475 (recD)
Enzymes [BR:
pter01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
C2L65_09475 (recD)
DNA repair and recombination proteins [BR:
pter03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
C2L65_09475 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
UvrD-helicase
NAT10_TcmA_helicase
SH3_13
Viral_helicase1
RecD_N
SLFN-g3_helicase
AAA_22
DEAD
AAA_25
MukB
Flavi_DEAD
CbiA
Motif
Other DBs
NCBI-ProteinID:
AUT59800
UniProt:
A0A2I8EJZ3
LinkDB
All DBs
Position
1:complement(2137461..2139470)
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AA seq
669 aa
AA seq
DB search
MSTFDQPLPDVEVNVPAPADFSTALAEGFARRVSALAQRGGASAEAVRWAARGAFAASRA
TSEGHVCVPLDELAQRYDAEVVQVRDALLASGVASDGAQPAHALRPLVVDGQGRLYLARY
YDYERRLAQSLVGHARGADQDAVSAGMSSQGLRDRLLRYFGEPQDDQIDWQRVAAVMALS
GRLTIVSGGPGTGKTTTVVGVLACLLDARADLRIALAAPTGKAAQRMQEALLARASSLPQ
ELAARLPQTSFTLHRLLGTGPNGRFRHHRDNPLPYDVIVIDEASMIDVAMATHLFDALAP
DTHLVMLGDKDQLAAVEAGAVFAELSAQPAFTAKGVGSIATALGIDERRLRDALPTGRDD
APSEETQLFFDDLFGMPSDVPSSSQDAQPAPLADCVVWLERNYRFGLESAIGQLSLAIRR
GAAQEALDVLHIDPAKPCAAAFHEDTDATPAERTIQRLAAGFAPYADALATALSDGAAGA
ASHALALFDALNRFRILCATRLGSRGVEQMNTAMATQVRRIARVPLAVGAQWFAGRPIMV
TRNDYALGLFNGDIGIALPGGDGALRVFFRSADGSLRAVSPAALPPHDTAFALTVHKSQG
SEFEHAVLMLPSTFSRVLSRELVYTAVTRARDRVEVVGSRAVLMRAIATPTQRDSGLAAR
IVEAMRDDV
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgagcacgttcgatcagccgttgcccgatgtcgaggtcaatgtccccgcacccgcggat
ttcagcacggcgctcgctgaaggcttcgcgcggcgcgtgagcgcgctcgcgcaacgcggc
ggcgcgtccgcagaggccgtgcgctgggccgcgcgcggcgcgttcgcggcgagccgcgcg
acgtcggaaggacacgtgtgcgtgccgctcgacgaactcgcgcagcgctacgacgccgag
gtcgtgcaagtgcgtgacgcgttactcgcgagcggtgtcgcaagcgacggcgcacagccg
gcgcatgcgctgcgcccgctcgtcgtcgatgggcaagggcggctttatctcgcgcgttac
tacgattatgaaaggcggcttgcgcagtcgctcgtcggacatgcgcgaggcgcggatcaa
gatgccgtgtcggcgggcatgtcatctcaaggtttgcgcgacaggctgctgcggtatttc
ggtgaaccgcaggacgatcagatcgactggcagcgcgtggccgccgtgatggcgctgtcc
gggcggctgacgatcgtcagtggcggtccgggcacgggtaagacgactaccgtcgttggc
gtgctcgcctgcctgctggatgcgcgcgcggacttgcgcatcgcgctcgccgcgccgacg
ggcaaggccgcgcagcggatgcaggaggcgctgcttgcgcgcgccagttcgttgccgcag
gaactcgcggcgcgtctgccgcaaacctcgttcacgttgcatcggttgttgggcaccggg
ccgaacgggcgcttccgtcatcatcgggacaacccgctgccgtatgacgtgatcgtgatc
gacgaggcgtcgatgatcgacgtcgcgatggcgacgcatctgttcgatgcgctcgcacct
gacacgcatctcgtgatgctcggcgacaaggatcaactcgcggctgtcgaagcgggcgcc
gtgttcgccgagttgagcgctcaacctgcgtttacggcgaagggcgttggctcgatcgcg
acggcactgggaatcgatgaacgccgtttgcgtgacgcgttgcccacgggccgcgacgat
gcgccgtcggaagaaacccagctgtttttcgacgacctgttcggcatgccgtccgacgtg
ccgtcttcatcgcaggatgcgcagccggcgccgctcgccgactgcgtcgtgtggctcgaa
cgcaactatcgcttcgggctggagtcggcgatcggccaactgtcgcttgcgatccggcgc
ggcgccgcgcaggaagcgctcgacgtgctgcatatcgatcccgccaaaccctgcgccgcg
gcgtttcacgaagacaccgatgccacgcctgccgaacgcacgatccagcggctcgcggcc
ggtttcgcgccctacgcggacgcgctcgcgacggcgctctccgacggcgcagcaggtgcg
gcctcgcacgcattggcgctgttcgacgcgctcaatcgcttccgcatcctgtgcgcgacg
cgactcggctcgcgcggcgtcgagcagatgaatacggcgatggccacgcaggtgcgccgc
attgcgcgcgtgccgctggccgtcggcgcgcaatggttcgcgggccgaccaatcatggtc
acgcgcaacgactatgcgctgggtcttttcaatggcgatatcggtatcgcgctgccggga
ggggatggcgcgctgcgcgtgttcttccgtagcgcggacggcagtctgcgcgcggtgtcg
cccgcggcgctgccgccgcacgacacggccttcgcgctcacggtccacaagtcgcaaggc
tcggagttcgaacacgcggtgctgatgctgccgtcgacgttcagccgggtgctgtcgcgc
gaactcgtctatacggccgtcacgcgggcgcgcgatcgcgtcgaggtggttggttcacgg
gccgtgctgatgcgcgcgatcgcaacgccgacgcagcgggactccgggcttgccgcgcga
atcgtcgaggcaatgcgggatgacgtgtga
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