Paraburkholderia terrae: C2L65_12875
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Entry
C2L65_12875 CDS
T05318
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
pter
Paraburkholderia terrae
Pathway
pter03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pter00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
C2L65_12875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pter03019
]
C2L65_12875
Enzymes [BR:
pter01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
C2L65_12875
Messenger RNA biogenesis [BR:
pter03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
C2L65_12875
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AUT60396
UniProt:
A0A2I8ELC1
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All DBs
Position
1:2923188..2924810
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AA seq
540 aa
AA seq
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MIKKLIRKLFGQDAEPADEAAPPAEADDYAVPEERAHTSRSPRTSSKAGAASSKGGTRRK
PAPAAVHEPDAPVIISSDIHGIDPSLISRNAIRVTEGLQQAGFRAFIVGGAVRDLLLGIA
PKDFDVATDATPEQVQKLFRRARIIGRRFQIVHVQFGQEIIETSTFRALVDAPPADADAP
PPRRLKRDELDRRTHAVDASGRVLRDNVWGEQHEDATRRDFTVNAMYYDPATQTVLDYHN
GMADVRARLLRMIGDPATRYREDPVRMLRVVRFAAKLDFDIDEATRAPITELADLINNVP
AARLFDEMLKLLLSGHALACLQRLRKEGLHHGLLPLLDVVLEQPHGEKFITLALNNTDAR
VRAGKPVSPGFLFATLLWHDMQQRWQQYEANGEFPVPALHRAMDDVLDMQTEKLAIHKRF
SSDMREIWGLQHRLEKRSGRSALKLLEHQRFRAGYDFLLLRCESGELDESVGSWWTEFIE
GDIAAREALLTQGGKDRAPRKRRRRSNSRNRSKQGDGMEGGTASENRAADDASHDGPHED
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
gtgatcaagaaactcattcgcaagctgttcggacaggacgcagagcccgctgacgaagcc
gcgcctcccgcagaagcagacgactacgctgtgccggaagagcgcgcgcacactagccgc
tcaccccgtacgtcatcgaaagctggcgctgcatcgtcgaagggcggtacgcgccgcaag
ccggcgccagcagccgtacacgagccggacgcgcccgtcatcatctcgtcggacattcac
ggcatcgacccatcgctgatttcgcgcaacgcgatccgcgtgacggaaggcctgcaacag
gcgggctttcgcgcgttcatcgtgggcggcgccgtgcgcgatctgctgctcggcatcgcg
ccgaaggacttcgacgtcgccacggacgccacgcccgaacaggtgcagaagctgttccgc
cgcgcgcgcatcatcgggcggcgattccagatcgtacacgtgcagttcggccaggaaatc
atcgaaacgtcgaccttccgcgcactcgtggacgccccgcccgccgatgccgacgccccg
ccgccgcgccgcctgaagcgcgacgagctggaccgtcgcacgcatgccgtcgatgccagc
ggccgcgtgctgcgcgacaacgtctggggcgagcagcacgaagacgccacgcgccgcgac
ttcaccgtcaacgcgatgtactacgatcccgcgacgcaaaccgtgctcgactaccacaac
ggcatggccgatgtgcgcgcgcgcttgctgcgcatgatcggcgatccggcaacgcgctat
cgcgaagacccggtgcgcatgctgcgcgtcgtgcgcttcgccgcgaagctcgatttcgat
atcgacgaagcgacgcgcgcgcccatcaccgaactcgccgatctgatcaacaacgtgccc
gctgcgcgtctgttcgacgagatgctcaagctgctgctgtcgggccatgcgctcgcgtgc
ctgcagcgtctgcgcaaggaaggcttgcatcacggtctcttgccgctgctcgacgtcgtg
ctcgaacagccgcatggcgagaagttcatcacgctcgcgttgaacaacaccgacgcgcgc
gtgcgcgccggcaagccggtgtcgccgggcttcctgttcgccaccctgctgtggcacgac
atgcagcaacgctggcagcagtacgaggcgaacggcgagttccccgtgcccgcgctgcat
cgcgcgatggacgacgtgctcgacatgcagaccgaaaagctcgccatccacaaacgcttc
tcgtcggatatgcgcgagatctggggcctgcagcatcgcctcgaaaaacgctcgggccgc
agcgcgctgaagttgctggaacaccaaagatttagagcggggtatgatttcctcctgttg
cgctgcgaatcgggcgaactggatgagtcggtcggttcgtggtggacggagttcatcgaa
ggagacatcgccgcgcgcgaagcactgcttacgcaaggcgggaaggaccgggcgcccaga
aaacgacggcggcgtagcaacagccgaaaccgcagcaaacagggcgacggaatggagggc
ggcacggcttcagaaaaccgcgcagcagacgatgcgagccacgacggcccgcatgaggac
tga
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