Paraburkholderia terrae: C2L65_13540
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Entry
C2L65_13540 CDS
T05318
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pter
Paraburkholderia terrae
Brite
KEGG Orthology (KO) [BR:
pter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pter03016
]
C2L65_13540
Enzymes [BR:
pter01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
C2L65_13540
Transfer RNA biogenesis [BR:
pter03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
C2L65_13540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
AUT60517
UniProt:
A0A2I8ELN8
LinkDB
All DBs
Position
1:complement(3069829..3071910)
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AA seq
693 aa
AA seq
DB search
MNVFFEESGSFKAGNVMSRQGDAFQVELPGGRRAKVRAKDVLMEFEKPSAGELMEQADAA
AQDIDLDFLWECAPEDEFPFATLGAEYFGESFGPVERAALILRMHGSPIYFRRKGRGQYQ
RAPEEQLKMALASLERKRQQALVQQGYEEELKAGRLPDGFQSKALGLLTKPDKNAIEYKA
LEAAAAARGISMARLMLECGGIPSARALHEARFLSEFFPHGTGFPAVTIGALPEDLPQAE
IEAFSIDDVTTTEIDDAFSVEHLSDGRVRIGIHIAAPALGIERGDAVDAIARGRLSTVYM
PGDKITMLPDSVVEKFTLAEGGLRPALSLYSIVNRETQEIVVSETRAELVYVKNNLRHNT
LDELVTEEALANGTGDYPHKEDIAVLWPFAQALFEKRQLARAGFGLKREVQRNTDFNFYV
EGEHVSITPRRRGSPLDTIVAELAILANSTWGAFLHDHGVPGIYRSQRAFGAPTGPKRTR
MQTTAAPHEGLGVSQYAWSTSPLRRYVDLVNQWQLIACVQHGVTAKLAAPFKPKDADLFA
VVQGFDDTYTAYADHQRRMEYFWCLRWLTQEGKKQVVASVVKGDLVRLEDVPLLLHVPGL
GVHARGTRLMLEVMSVDELTVEASVRPLHVLDAPTVTSGAEEEEEAEEELIDAADESAES
EAEAQAEADTAAAEGDQPADSNDSTQHATEQGQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
gtgaacgttttcttcgaggaatcgggtagtttcaaggccggcaacgtgatgtcgcgtcaa
ggcgacgcgtttcaggtcgagctgccgggcgggcgccgcgcgaaagttcgcgcgaaagac
gtgctgatggagttcgagaagccgtcggcgggcgaactgatggaacaggccgatgccgcc
gcacaggacatcgatctggactttctgtgggaatgcgcgcctgaagacgaattcccgttt
gccacgctcggcgccgaatactttggcgagtcgttcgggcccgtcgagcgcgccgcgctg
attttgcgcatgcacggttcgcccatctatttccgtcgcaaggggcgcggccagtatcag
cgcgcgccggaagagcagctgaagatggcgctcgcgtcgctcgaacgcaagcgtcagcag
gcgctcgtgcaacagggctacgaagaggaactgaaggcgggacgtctgccggacggattc
cagagcaaggcgctcggcctgttgacgaagcccgacaagaacgcgatcgaatacaaggcg
ctcgaagcggcagcggcggcgcgcggcatttcgatggcgcgtctgatgcttgagtgcggc
ggcattccgtcggcgcgcgcgctgcacgaagcgcgcttcctgtcggaattcttcccgcac
ggcacgggtttccccgccgtgacgatcggtgcgctgccggaagatctgccgcaagccgaa
atcgaagcgttctcgatcgacgacgtgaccacgacggaaatcgacgatgcgttctccgtc
gagcatctgtccgacgggcgtgtgcggatcggcattcacatcgcggcgccggcgctgggc
atcgaacgcggcgatgccgtcgatgcgatcgcgcgcggccgcttgtccaccgtctacatg
ccgggcgacaagatcacgatgctgcccgattccgtcgtggaaaaattcacgctggccgaa
ggcggtttgcgcccggcgctgtcgctgtacagcatcgtgaaccgcgagacgcaggaaatc
gtcgttagcgaaacgcgcgccgaactcgtctacgtgaagaacaatctgcgccacaacacg
ctcgacgaactcgtcacggaagaggcgctcgccaatggcacgggcgactatccgcataaa
gaagacatcgcagtgctgtggccgttcgcgcaggcgctgttcgagaagcgccagctggcg
cgcgccggtttcggcctcaagcgcgaagtgcagcgcaatacggatttcaacttctacgtc
gaaggcgagcacgtgagcatcacgccgcgccgccgcggttcgccgctcgatacgatcgtc
gccgaactggcgattctcgcgaactcgacgtggggcgcgttcctgcacgatcacggcgtg
cccggcatctatcgctcgcagcgcgcgttcggcgcgccgacgggaccgaagcgcacccgc
atgcagacgacggccgcgccgcacgaaggcctcggcgtgtcgcagtacgcgtggagcacc
tcgccgctgcgccgctacgtcgacctcgtcaaccagtggcaactgatcgcgtgcgtgcag
cacggcgtgacggccaagctcgcggcgccgttcaagccgaaggacgccgacctgttcgcc
gtcgtgcaaggcttcgacgacacctacaccgcatacgccgatcaccagcgtcgcatggag
tatttctggtgtctgcgctggctcacgcaggaaggcaagaagcaggtggtcgcttccgtc
gtgaagggcgatctcgtgcgtctcgaagacgtgccgctgctgctgcacgtgccgggtctg
ggcgtgcatgcgcgcggcacgcggctgatgctcgaagtcatgtcggtggatgaactgacg
gtcgaggcatcggtgcggccgttgcacgtgctcgacgcgccgaccgtgacgagcggcgcg
gaagaagaggaagaggccgaagaagaactcatcgacgccgccgacgaatccgccgaaagc
gaagccgaagcgcaagccgaagctgatacggctgccgctgagggcgaccagcccgccgac
tcgaacgattcaacgcaacacgcgacggagcagggccaatga
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