Paraburkholderia terrae: C2L65_14725
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Entry
C2L65_14725 CDS
T05318
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
pter
Paraburkholderia terrae
Pathway
pter03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pter00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
C2L65_14725 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pter03021
]
C2L65_14725 (rpoC)
03400 DNA repair and recombination proteins [BR:
pter03400
]
C2L65_14725 (rpoC)
Enzymes [BR:
pter01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
C2L65_14725 (rpoC)
Transcription machinery [BR:
pter03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
C2L65_14725 (rpoC)
DNA repair and recombination proteins [BR:
pter03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
C2L65_14725 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Peptidase_M23
PYNP_C
Baculo_ME53
Motif
Other DBs
NCBI-ProteinID:
AUT60736
UniProt:
A0A2I8EMB0
LinkDB
All DBs
Position
1:complement(3304974..3309215)
Genome browser
AA seq
1413 aa
AA seq
DB search
MKALLDLFKQVQQEEVFDAIKIGLASPDKIRSWSFGEVKKPETINYRTFKPERDGLFCAK
IFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTLAKVRRERMGHIELASPVAHIWFLKSL
PSRLGMVLDMTLRDIERVLYFEAYVVIDPGMTPLKARQIMTEEDYYNKVEEYGDEFRAEM
GAEGVRELLRAINIDEQVETLRSELKNTGSEAKIKKYAKRLKVLEAFQRSGIKPEWMILE
VLPVLPPELRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELKAPEIIVRNEKRMLQ
EAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVIVVGPT
LKLHQCGLPKLMALELFKPFIFNKLEVMGVATTIKAAKKEVENQTPVVWDILEEVIREHP
VMLNRAPTLHRLGIQAFEPVLIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQMEA
RTLMLASNNVLFPANGDPSIVPSQDIVLGLYYATREAVNAKGEGLTFTGVSEALRAYENK
EVELASRVNVRITEMVHNEDKSEGAPAFVPKITLYATTVGRSILSEILPPGLPFSVLNKP
LKKKEISRLINTAFRKCGLRETVIFADQLMQSGFRLATRAGISICVDDMLVPPQKETIVG
DAAKKVKEYDRQYMSGLVTSQERYNNVVDIWSATSEAVGKAMMEQLSTEPVTDRDGNETR
QESFNSIYMMADSGARGSAVQIRQLAGMRGLMAKPDGSIIETPITANFREGLNVLQYFIS
THGARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSNGVAMKALVEGGEVVEAL
RDRILGRVTVADVVNPESQETLYETGTLLDEDAVEEIERLGIDEVRVRTPLTCETRYGLC
AACYGRDLGRGSSVNVGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAVASSVEAKSN
GTVRFTSTMRYVTNAKGEQIVISRSGEAMITDDHGRERERHKVPYGATLLQLDGAQIKAG
TQLATWDPLTRPIITEWGGTVKFENVEEGVTVAKQIDDVTGLSTLVVIDVKRRGSQASKS
VRPQVKLLDANGEEVKIPNSEHSVQIGFQVGALITVKDGQQVQVGEVLARIPTEAQKTRD
ITGGLPRVAELFEARSPKDAGILAEVTGTTSFGKDTKGKQRLVITDLEGNQHEFLIAKEK
QVLVHDGQVVNKGEMIVDGPADPHDILRLQGIEALSRYIVDEVQDVYRLQGVKINDKHIE
VIVRQMLRRVQISDNGDTRFIPGEQVERSDMLDENDRMIAEDKRPATYENILLGITKASL
STDSFISAASFQETTRVLTEAAIMGKRDDLRGLKENVIVGRLIPAGTGLAFHKARKTKEM
ADRERFDQIAAEEAFEFGTPETPAAEQTPHTNE
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctctgctcgatctattcaagcaagtccaacaggaagaagtttttgacgcgatc
aagatcggtctggcctcgccggacaagatccgttcgtggtcgttcggtgaagtcaagaag
ccggaaacgatcaactaccgcacgttcaagccggagcgggatggtctgttctgcgcgaag
attttcggtccgatcaaggactacgaatgcctttgcggcaagtacaagcgcctgaagcac
cgtggcgtgatctgcgagaagtgcggcgtcgaagtgacgctcgcgaaggtgcgtcgcgaa
cgcatgggccacatcgaactggcctcgcctgtcgcgcacatctggttcctgaagtcgctg
ccgtcgcgtctgggcatggtgctcgacatgacgctgcgcgacatcgagcgtgtgctgtac
ttcgaagcatatgtggtgatcgatccgggcatgacgccgctgaaggcgcgtcagatcatg
acggaagaggattactacaataaggtcgaagagtacggtgacgaattccgcgctgagatg
ggcgcggaaggcgtgcgcgaactgctgcgcgcgatcaacatcgacgagcaggtcgaaacg
ctgcgctcggagctgaagaacacgggctcggaagcgaagatcaagaagtacgcgaagcgt
ctgaaggtactcgaggcattccagcgttcgggcatcaagcccgagtggatgattctcgaa
gtgctgccggtgctgccgccggaactgcgtccgctggttccgctggacggcggtcgtttc
gcaacttcggacctgaacgacctgtatcgccgagtgatcaaccgtaacaaccggttgaag
cgtctgctcgaactgaaggcgcctgaaatcatcgtccgtaacgaaaagcggatgctgcag
gaagccgtcgattcgctgctcgacaacggccgtcgcggtaaggcgatgacgggcgcgaac
aagcgtccgctgaagtcgctcgccgacatgatcaagggtaagggcggtcgcttccgtcag
aacctgctgggcaagcgcgtcgactactcgggccgttcggtcatcgtggtcggcccgacg
ctgaagctgcaccagtgcggtctgccgaagctgatggcgctcgaactgttcaagccgttc
atcttcaacaagctggaagtgatgggtgttgctaccaccatcaaggctgcgaagaaggaa
gtcgagaaccagacgccggtggtgtgggacatcctcgaagaggtgatccgcgagcatccg
gtgatgctgaaccgcgcgcctacgcttcaccgtcttggcattcaggctttcgagccggtg
ctgatcgaaggtaaggcaatccagctgcacccgctcgtttgcgcggcgttcaacgccgac
ttcgacggtgaccagatggctgttcacgttccgctgtcgctcgaagcgcagatggaagcg
cgcacgctgatgctggcgtcgaacaacgtgctgttcccggccaacggcgatccgtcgatc
gtgccgtcgcaggatatcgtgctcggtttgtactacgcgactcgtgaagctgtgaacgcc
aagggcgaaggcctgacgttcacgggcgtctcggaagcgctgcgtgcctacgagaacaag
gaagtcgagctcgcctcgcgcgtcaacgtgcggatcaccgaaatggtccataacgaagac
aagtcggaaggtgcgccggcgttcgtgccgaagatcacgctgtacgcgacgaccgtcggc
cgttcgatcctgtcggaaattctgccgccgggcctgccgttctcggtgctgaacaagccg
ctgaagaagaaggaaatctcgcgtctgatcaataccgcattccgcaagtgcggtctgcgt
gaaacggtgattttcgccgaccagttgatgcagtcgggtttccgtctggcaacgcgcgct
ggtatctcgatctgcgtcgacgacatgctcgtgccgccgcagaaggaaaccatcgtcggc
gacgccgcgaagaaggtgaaggaatacgaccgtcagtacatgtcgggtctcgtcacgtcg
caagaacgctacaacaacgtggtcgacatctggtcggcaacgtcggaagcggtcggcaag
gcgatgatggaacagctgtcgacggaaccggtcacggatcgcgacggcaacgaaacgcgt
caggaatcgttcaactcgatttacatgatggcggactcgggtgctcgtggttccgcggtt
cagattcgtcagctggccggtatgcgtggcctgatggcgaagccggacggctcgatcatc
gagacgccgattacggcgaacttccgtgaaggcctgaacgtgttgcagtacttcatctcg
acccacggcgcacgtaagggtctggctgatacggcactgaagacggcaaactcgggttac
ctgacgcgtcgtctcgtcgacgtgacgcaggatctggtggtggtcgaggacgattgcggt
acgtccaacggcgtcgccatgaaggcgttggttgaaggcggtgaagtcgtcgaagcgctg
cgtgaccgtattctcggtcgcgtgacggtggctgacgtcgtcaatccggagtcgcaggaa
acgctgtacgaaacgggcacgttgctcgatgaagacgcggtcgaagaaatcgaacgcctc
ggcatcgacgaagtgcgcgtgcgtacgccgctgacttgcgaaacgcgttacggtctgtgc
gcagcctgctacggccgcgacctgggccgcggctcgtcggtcaacgtcggcgaagcagtg
ggcgtgatcgctgcgcagtcgatcggtgagccgggcacgcagctgaccatgcgtacgttc
cacatcggtggtgcggcatcgcgtgcggcagtggcgtcgtcggtcgaagcgaagtcgaac
ggtacggtgcgtttcacgtcgacgatgcgttacgtgacgaatgcgaagggcgagcagatc
gtcatctcgcgttcgggcgaagcgatgatcaccgacgatcacggccgcgagcgcgagcgt
cacaaggtgccgtacggcgcgacgctgctgcaactcgacggcgcgcagatcaaggcgggc
acgcaactggccacgtgggatccgctgacgcgtccgatcatcaccgagtggggcggtacg
gtgaagttcgaaaacgtcgaagaaggcgtgacggtcgcgaagcagatcgacgacgtgacg
ggtctttcgacgctcgtcgtgatcgacgtgaagcgccgcggttcgcaggcttcgaagagc
gtgcgtccgcaggtgaagctgctcgacgcgaacggcgaagaagtcaagatcccgaactcg
gagcactcggttcagatcggcttccaggtcggcgcactgatcaccgtgaaggacggtcag
caggttcaggtgggtgaagtgctcgcacgtatcccgactgaagcgcagaagacgcgtgac
attacgggtggtctgccgcgtgtggcggaactgttcgaagcacgttcgccgaaggacgca
ggtatcctggcggaagtcacgggtacgacgtcgttcggtaaggacacgaagggcaagcag
cgtctcgttatcacggacctcgaaggcaatcagcacgagttcctgattgcgaaggaaaag
caggttctggttcacgatggtcaagtcgtcaacaagggcgaaatgatcgtcgacgggccg
gcggatccgcacgacatcctgcgtctgcagggtatcgaagcgctgtcgcgttacatcgtg
gacgaagtgcaggacgtgtaccgtctgcagggcgtgaagatcaacgacaagcacatcgag
gtgatcgtgcgtcagatgctgcgtcgcgttcagatcagcgacaacggcgatacgcgcttc
atcccgggtgagcaggtcgagcgttcggacatgctggacgaaaacgatcgcatgatcgcg
gaagacaagcgtccggcaacgtacgagaacatcctgctgggtatcacgaaggcgtcgctg
tcgaccgattcgttcatctccgcggcatcgttccaggaaacgacccgcgtgctgacggaa
gcggcgatcatgggcaagcgcgacgatctgcgtggcctgaaggaaaacgtgatcgttggt
cgtctgattccggccggtacgggtctcgcgttccacaaggcgcgcaagaccaaggaaatg
gcggatcgcgagcgtttcgaccagatcgctgcagaagaggccttcgagttcggtacgccg
gaaaccccggccgccgagcaaacgccgcacaccaacgagtaa
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