KEGG   Paraburkholderia terrae: C2L65_16635
Entry
C2L65_16635       CDS       T05318                                 
Name
(GenBank) RNA polymerase subunit sigma
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pter  Paraburkholderia terrae
Pathway
pter02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pter00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    C2L65_16635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pter03021]
    C2L65_16635
Transcription machinery [BR:pter03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     C2L65_16635
SSDB
Motif
Pfam: Sigma70_r2 Sigma70_r4_2 Sigma70_ECF Sigma70_r4 HTH_23 GerE HTH_24 HTH_Tnp_ISL3 Phage_NinH HTH_28 HTH_40 HTH_7
Other DBs
NCBI-ProteinID: AUT61364
LinkDB
Position
2:complement(96610..97122)
AA seq 170 aa
MPADNLSLRLEVEDLYVAHHGWLHTWLRRKLGCAHRAADLAHDTFMRLLARDEPLELLEP
RAFLTTVAQRVLANHWRREQIERAYLEALALVPEPLAPSPEERAVLLETLCEIDALLDGL
PVPVKRAFLMAQLDGATQTEIAATLRISLATVKRYLLKAAAQCFFAMKLD
NT seq 513 nt   +upstreamnt  +downstreamnt
atgccggcagacaatctctcgttgcgtctcgaggtcgaagacctctacgtcgcccatcat
ggctggcttcatacgtggttgcgccgcaagctgggatgcgcgcatcgggcggccgacctt
gcacacgacaccttcatgcgcctgctcgcgcgcgacgaaccgcttgaattgctcgagccg
cgcgccttcctcacgaccgtcgcccagcgcgtcctggcgaatcactggcgacgtgagcag
atcgagcgcgcctatctcgaagcgctcgcgctggtgccggagccacttgcgccatcgccc
gaagaacgtgctgtgctgctcgaaaccttgtgcgagatcgacgcgttgctcgacggtctg
cccgtacccgtcaaacgcgcgttcctgatggcgcaactcgacggcgcgacacagacggaa
atcgcggccacgcttcgtatctccctcgcgacggtgaagcgctatctgctgaaagcggca
gcgcaatgcttcttcgcgatgaaactggattag

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