Paraburkholderia terrae: C2L65_16635
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Entry
C2L65_16635 CDS
T05318
Name
(GenBank) RNA polymerase subunit sigma
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pter
Paraburkholderia terrae
Pathway
pter02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pter00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
C2L65_16635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pter03021
]
C2L65_16635
Transcription machinery [BR:
pter03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C2L65_16635
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_ECF
Sigma70_r4
HTH_23
GerE
HTH_24
HTH_Tnp_ISL3
Phage_NinH
HTH_28
HTH_40
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AUT61364
LinkDB
All DBs
Position
2:complement(96610..97122)
Genome browser
AA seq
170 aa
AA seq
DB search
MPADNLSLRLEVEDLYVAHHGWLHTWLRRKLGCAHRAADLAHDTFMRLLARDEPLELLEP
RAFLTTVAQRVLANHWRREQIERAYLEALALVPEPLAPSPEERAVLLETLCEIDALLDGL
PVPVKRAFLMAQLDGATQTEIAATLRISLATVKRYLLKAAAQCFFAMKLD
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgccggcagacaatctctcgttgcgtctcgaggtcgaagacctctacgtcgcccatcat
ggctggcttcatacgtggttgcgccgcaagctgggatgcgcgcatcgggcggccgacctt
gcacacgacaccttcatgcgcctgctcgcgcgcgacgaaccgcttgaattgctcgagccg
cgcgccttcctcacgaccgtcgcccagcgcgtcctggcgaatcactggcgacgtgagcag
atcgagcgcgcctatctcgaagcgctcgcgctggtgccggagccacttgcgccatcgccc
gaagaacgtgctgtgctgctcgaaaccttgtgcgagatcgacgcgttgctcgacggtctg
cccgtacccgtcaaacgcgcgttcctgatggcgcaactcgacggcgcgacacagacggaa
atcgcggccacgcttcgtatctccctcgcgacggtgaagcgctatctgctgaaagcggca
gcgcaatgcttcttcgcgatgaaactggattag
DBGET
integrated database retrieval system