Paraburkholderia terrae: C2L65_19600
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Entry
C2L65_19600 CDS
T05318
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pter
Paraburkholderia terrae
Pathway
pter02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pter00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
C2L65_19600
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pter03021
]
C2L65_19600
Transcription machinery [BR:
pter03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
C2L65_19600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Exonuc_VII_L
PspA_IM30
MitMem_reg
Motif
Other DBs
NCBI-ProteinID:
AUT61897
UniProt:
A0A2I8EQL3
LinkDB
All DBs
Position
2:complement(767029..769026)
Genome browser
AA seq
665 aa
AA seq
DB search
MAKLDRDNSQFETTAPKAPKRAAKAKAQPAAAPLDAALLESLVEERQRQMRALIALGRER
GYLTHADINDHLPDNFTETAAMETIVSTFGEMGVSVYETAPDAETLLLNDGPSAAASDDQ
ADEEAEVALSTVDSEFGRTTDPVRMYMREMGASELLTRAGEIEIAKRIEGGLQDMVQAIA
MCPSIISTILADVDRVVAGEIRIDELVDGISDTSEAAELDEEAADAAAEEELEASASDED
SDDEDGDLSDDGGEKANAARLEQLTADSLAIFGRVRDLFASVPDMPVTDKRRATAIANLR
ESIQQELTPIRFTAKTIDRLCAEVQAQVAQVRAIERHILQIAVDRCDMPREAFVESFPGN
ETDLDWTMRIAAKSKSYGPALERHLPAIQSEQQKLVDIEASIALPLQQLKQINKQLGSAE
GKMRQAKREMIEANLRLVISIAKKYVNRGMHFLDLIQEGNIGLMKAVDKFEYRRGWKFST
YATWWVRQAITRAIADQARTIRVPVHMIESINKLNRIQREIVQQTGQEPHPSVLAERMDM
PEAKIRSILKIAKNPASLDSPVGEDADTTLGDMIEDTSATSPADAAVHANMRRAIDEALD
ALTPREAKVLRMRYGIDTASELTLEEVGRQFDVTRERIRQIEGKAIRKLNHPSRADKLRP
FLERS
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaagcttgaccgggacaattcccagttcgaaaccaccgcaccaaaggcgcccaag
cgcgcagcaaaagcgaaggcgcaacccgccgccgcgccgctagatgcggccttgctggaa
tccctcgttgaagagcgtcaacgtcagatgcgcgcgctgatcgcgctgggccgcgaacgc
ggctatttgacgcacgccgacatcaacgaccacttgcccgacaatttcaccgaaacggcc
gcgatggaaaccatcgtcagcacgttcggcgaaatgggcgtgtccgtgtacgaaacggcg
cccgacgcggaaacgctgcttctgaacgacggcccgtcggctgccgcatcggacgatcag
gccgatgaggaagcggaagtcgcgctgtccacggtcgactccgaattcggccgcaccacc
gacccggtccgcatgtatatgcgcgaaatgggtgcaagcgagctgctcacgcgcgccggc
gaaatcgaaatcgccaagcgcatcgaaggcggcctgcaggacatggtgcaagccatcgca
atgtgcccgtcgatcatctcgacgatcctcgcggacgtggaccgcgtcgtcgcgggtgaa
atccgcatcgacgaactggtcgacggcatcagcgacacgagcgaagccgccgaactcgac
gaggaagcagcggacgccgctgcggaagaagagctggaagcgagcgcctcggacgaagat
tcggacgacgaagacggcgacctgtcggacgacggcggcgaaaaagccaacgccgcgcgc
ctcgagcaactgactgcggacagcctcgcgatcttcgggcgcgtgcgcgacctcttcgcg
agcgtgcccgacatgcccgtcacggacaagcgccgcgccaccgccatcgcgaacctgcgc
gagtcgatccagcaggaactcacgccgatccgcttcacggccaagaccatcgaccgcctg
tgcgcggaagtgcaggcgcaggtcgcgcaggttcgcgcgatcgaacgccacatcctgcag
atcgccgtggatcgctgcgacatgccgcgcgaagcattcgtcgaatcgttcccgggcaat
gaaaccgatctcgactggacgatgcgcatcgccgcgaagtcgaagtcgtacggtccggcg
ctcgagcgtcacctgcctgcgatccagtcggaacagcagaagctggtcgacatcgaagcg
tcgatcgcgctgccgctgcagcagctcaagcagatcaacaagcagctcggctcggctgaa
ggcaagatgcgtcaggccaagcgcgagatgatcgaagcaaacctgcgtctcgtcatttcg
atcgcgaaaaagtatgtcaatcgcggcatgcacttcctcgacctgatccaggaaggcaac
atcggtttgatgaaggcagtggacaagttcgaataccgtcgcggctggaagttctcgacg
tacgcaacgtggtgggtccgtcaggccatcacgcgcgcgatcgccgaccaggcgcgcacc
attcgtgtgcccgttcacatgatcgaatcgatcaacaagctgaaccgcattcagcgcgag
atcgttcagcagacgggtcaggagccgcatccgtcggtgctcgccgagcgcatggacatg
cccgaagcgaagatccgcagcatcctgaagatcgcgaagaatccggcctcgctggattcg
cccgtgggcgaagatgccgacacgacgctcggcgacatgatcgaagacacgtccgcgacg
tcgcccgccgacgccgccgtgcatgcgaacatgcgccgcgcgatcgacgaagcgctcgac
gctctcacgccgcgtgaggcgaaggtgctgcgcatgcgctacggcatcgacacggcctcg
gaactgacgctcgaagaagtgggccgccagttcgacgtgacgcgcgagcgtatccgccag
atcgaaggcaaggcgatccgcaagctgaatcatccgagccgcgcggacaagctgcgcccg
ttcctcgaacgcagctga
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integrated database retrieval system
