Paraburkholderia terrae: C2L65_23500
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Entry
C2L65_23500 CDS
T05318
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pter
Paraburkholderia terrae
Brite
KEGG Orthology (KO) [BR:
pter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pter03032
]
C2L65_23500
03400 DNA repair and recombination proteins [BR:
pter03400
]
C2L65_23500
Enzymes [BR:
pter01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
C2L65_23500
DNA replication proteins [BR:
pter03032
]
Prokaryotic type
DNA Topoisomerases
C2L65_23500
DNA repair and recombination proteins [BR:
pter03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
C2L65_23500
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AUT62584
UniProt:
A0A2I8EUV5
LinkDB
All DBs
Position
2:1632247..1633383
Genome browser
AA seq
378 aa
AA seq
DB search
MKTMTRNAIDAIAKGLSTAMPAGLRHADDTRPGFTRRKLRGVFVYFDLDGKRIDDETQIA
RINALAIPPAYTDVWICPDPRGHIQATGRDARGRKQYRYHPQWRETRDADKFGRMAAFGH
ALPKIRARVARDLAREGMPREKVIAAVVHLLDTTLIRIGSVEYARDNQSYGLTTLRKKHV
KIRAGEVRFRFAGKSGIEHDVTVDNARVKRIVRRCAELPGHDLFQYIDEDGARHTIGSAD
INEYLRDISSADFSAKDYRTWAGSVYAMAVLRQLVCESAADTRRHVVATVKEVATLLRNT
PAVCKRCYIHPEVIAAFEAGELQSLLPQRTKRHMKVDEAAFAALLVQVEKRARLATLLTR
SSALRKQANTRKRAARPA
NT seq
1137 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgatgacacgcaacgcgatcgatgcgatcgccaagggactgtccaccgcgatg
ccggcgggactgcggcatgccgacgacacacggccaggcttcacgcgcagaaagctcaga
ggcgtattcgtttatttcgatctcgacggcaaacgcatcgacgacgaaacgcagattgcg
cgcatcaacgcactcgcgataccgcccgcctacaccgatgtctggatctgccccgacccg
cgcggccacattcaggcgacgggccgcgatgcgcggggccgcaagcagtaccgttaccac
cctcaatggcgcgaaacgcgcgacgccgacaagttcggccgcatggccgcgttcgggcat
gcgctgccgaagatacgagcgcgagtcgcacgcgatctggcgcgcgaaggcatgccacgc
gagaaggtgattgcggccgtcgtgcatctgctcgatacaacactgatccggatcggcagc
gtcgaatatgcgcgcgacaaccagtcctatggccttaccacgctgcgcaagaagcacgtg
aagattcgcgcgggcgaagtgcgtttccggttcgcgggaaagagcggcatcgagcacgac
gtgaccgtcgacaatgcgcgcgtcaagcgtattgtgcgcaggtgcgcggagttgccgggc
cacgacctgttccagtacatcgacgaagacggcgcgcgccatacgatcggctccgccgat
atcaacgagtacttacgcgacatcagcagcgcggacttctcggcgaaggactatcgcacg
tgggcgggcagcgtctatgcgatggcggtgctgcgccagctggtgtgcgaaagcgccgct
gatacgcgccgtcatgtcgtcgcgaccgtgaaagaagtggccacgctattgcgcaacacg
cctgctgtatgcaagcgctgctatatccaccctgaagtgattgcggcctttgaagccggc
gagttgcaaagcctgctgccgcagcgcacgaagcgccacatgaaggtcgacgaagcggca
ttcgccgcgctgctcgttcaagtggaaaagcgcgcgcggctcgcaacgctgctcacaagg
tcgagcgcgctgcgcaagcaggcgaacacgcgaaagcgcgccgcccgtcccgcgtga
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