Paraburkholderia terrae: C2L65_26565
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Entry
C2L65_26565 CDS
T05318
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
pter
Paraburkholderia terrae
Brite
KEGG Orthology (KO) [BR:
pter00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pter03000
]
C2L65_26565
Transcription factors [BR:
pter03000
]
Prokaryotic type
Helix-turn-helix
Other families
C2L65_26565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
HTH_8
GAF
Mg_chelatase
HTH_23
AAA_2
HTH_30
AAA_5
HTH_20
HVO_A0261_N
HTH_50
HTH_AsnC-type
HTH_28
HTH_1
HTH_29
HTH_22
Motif
Other DBs
NCBI-ProteinID:
AUT63116
UniProt:
A0A2I8EU87
LinkDB
All DBs
Position
2:2310613..2312562
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AA seq
649 aa
AA seq
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MPYVSQTQHVDRVRGAIEGRLPAPANSSRLVSSWQRSYEQYQLDPSSVIGPRVLTTSELR
EVQGKEEAFLRASGQCLTRLHDMIRVADYCVMLTDAHGVTIDYRIDRDRRGDFKHAGLYI
GSCWSEREEGTCGIANVLTDLAPITVHKTDHFRAAFTTLTCSASPIFSLTGELIGVLDAS
AVQSPDNRDSQRLVFQLVRQSAALIEDGYFLNQTTQHWVIFGHQSRNFVEAQPEVLIAFD
ECGNIAASNRKAQECIAGLSGPRHVDEIFDTSAVHLHDVARTDTIVPLRLRATGAVLYAR
IRAPLKRTSRVAPVVSSSSAVNASSDAHADTSLDAISRFLHSRDSRIARNAEVALRIAGK
HLPILILGETGVGKEVFAQALHASGARRAKPFVAVNCGAIPDSLIESELFGYAPGAFTGA
RSRGARGKIAQANGGTLFLDEIGDMPLNLQTRLLRVLAEGEVLPLGSDAPVRVDIDVICA
THRDLARMVDEGTFREDLFYRLSGATLHMPPLRERADVLDVVRAVFDEEAQSAGHVLTLD
ARLAERLARFSWPGNIRQLRNVLRYACAVCDATRVELRHVSPDVAALLAPDEAAPRPALA
GLDDERARIVDALTRHQWRPNAAAEALGMSRATLYRRIAKLGIVGPHRS
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgtctctcaaacgcagcacgtcgaccgcgtgcgcggcgccatcgaaggacgc
ttgcccgcgcccgccaattcgtcgcgtctggtgtcgtcgtggcagcgttcgtatgagcaa
taccagctcgatcccagttcggtgatcgggccgcgcgtgctgaccacgtccgagctgcgc
gaagtgcaaggcaaggaagaagcgtttctgcgcgcgtcgggccagtgcctcacgcgtctg
cacgacatgatccgcgtggccgactattgcgtgatgctcaccgacgcacacggcgtcacg
atcgactaccgcatcgaccgcgaccggcgcggcgatttcaagcatgcaggtctgtacatc
ggctcgtgctggtcggaacgcgaggaaggcacgtgcggcatcgcgaacgtgctgacggat
ctcgcgcccatcaccgtccacaagaccgatcacttccgtgcggcgtttacgacgctcacc
tgcagcgcatcaccgatcttctcgctgacgggcgaactgatcggcgttctcgatgcgtcc
gccgtgcaatcaccggacaatcgcgacagccagcggctcgtgtttcagctggtgcgccag
agcgcggcgctgatcgaagacggctacttcctcaatcagaccacgcagcattgggtgatc
ttcggccaccagagccgcaatttcgtcgaggcgcaaccggaagtgctgatcgcgttcgac
gaatgcggcaacatcgccgcgtcgaatcgcaaggcgcaggagtgcatcgcgggcttgagc
gggccgcgtcacgtcgacgaaatcttcgatacgtccgccgtgcatctgcacgacgtagcg
cgcaccgatacgatcgtgccgctgcgtctgcgcgcgacgggcgccgtgctgtatgcgcgg
attcgcgcgccgttgaagcgcacttcgcgcgtcgcgcccgtcgtgtcttcctcgagcgcc
gtcaacgcatcgtccgatgcgcacgccgacacgagcctcgacgcgatcagccgctttctg
cacagccgcgactcgcgcatcgcgcgcaatgcggaagtcgcgctacgcatcgcgggcaag
catctgccaattctgattctcggcgagacgggcgtcggcaaggaagtgttcgcgcaggcg
ctgcatgcgtcgggcgcgcggcgcgccaagccgttcgtcgccgtgaattgcggcgcgatc
cccgattcgctgatcgaaagcgagctgttcggctatgcgcccggcgcgttcacgggtgcg
cgcagccgcggcgcgcgcggcaagatcgcgcaggcaaacggcggcacgctgtttctcgat
gaaatcggcgacatgccgctcaatctgcaaacgcgcctgttgcgtgtgctcgccgaaggc
gaagtgctgccgctcggcagcgatgcgcctgtgcgcgtggatatcgacgtgatctgcgcg
acgcatcgcgatctcgcccgcatggtcgacgaaggtacgttccgcgaagacctgttttac
cggctgagcggcgcgacgctgcatatgccgccgctgcgcgagcgcgccgatgtgctagat
gtcgtgcgtgccgtgttcgatgaagaagcgcaaagcgcgggacatgtgctcacgctggat
gcgcgtctcgcagagcggcttgcgcgtttctcgtggcctggcaatatccggcaactgcgc
aacgtgctgcgctatgcatgcgcggtgtgcgatgcgacgcgcgtcgagttgcggcatgtg
tcgcccgatgtggcggcgttgctcgcgcccgatgaagccgcgccgcgccctgcgctcgcc
ggcctcgacgacgagcgggcgcgcatcgtcgatgcgctcacgcggcatcaatggcgaccg
aacgcggcggccgaagcgctcggcatgtcgcgcgcgacgttgtatcggcggattgcgaaa
ctggggatcgtcgggccgcatcggagttga
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