Paralysiella testudinis: JQU52_02685
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Entry
JQU52_02685 CDS
T07686
Name
(GenBank) RNB domain-containing ribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
ptes
Paralysiella testudinis
Brite
KEGG Orthology (KO) [BR:
ptes00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ptes03016
]
JQU52_02685
Enzymes [BR:
ptes01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
JQU52_02685
Transfer RNA biogenesis [BR:
ptes03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
JQU52_02685
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
Transgly
Motif
Other DBs
NCBI-ProteinID:
QRQ82336
UniProt:
A0A892ZKX1
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All DBs
Position
complement(503025..504896)
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AA seq
623 aa
AA seq
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MSKHLFYEESGQFKVATIVQQNDATYLVDTQHGKRAKVKANNVFLTFEGDAAAFLQTAQT
QAAEIDVDLLWSVCGEEEFSGQTAAQEYFGNNPSQTEQAAILIALFAAPMYFYKKAKGIF
KAAPEETLRQALAAIERKQQQEAQIAAWVAELAEGRLPEAVAADLPSLLHAPDKQSLTYK
AFTKAADQQKKSPFALAQALGGVPSLPQYFLDGFLLKNFPHGIGWGDVSLPPMPALPQAA
AMAFSIDDIDTTEVDDALSLQVLPNGNHLIGIHIAAPALAMAAGDDMEAQVFARQSTVYY
PSGKITMLPDEWVAAFSLDAGQHRPAVSLYAEVDADYKVVATHHQVEAVWISENLRIQNI
EPLFLPQQARSQTEAFPHQTQMNWLYDFAIAQQQARGKYDPTRPPQYDYGIVVDDQEHVS
ISVRERGAPIDTVVSELMILANSTWAQMLHEAEVGGLFRVQPAGKVRMSTQSEPHIGLGL
QHYAWFTSPLRRAADYINQKQLLSLIQPDTPPRFAPKDGMLFAALRDFESTYTAYADFQR
QMESYWSLVYVQQQQLNELNAVVLKEDLVRIEGLPLVARASGIPVDALPKSRVRLAVSGV
DLNQISIGLNYLNAIAPSPIDAA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaacacctgttttatgaagaatccggccaattcaaagtggccaccattgtgcag
caaaacgatgccacttatctggtcgacacccagcacggcaagcgtgccaaagtgaaggcc
aataatgtgtttctcaccttcgagggtgatgccgccgcgtttttacagactgcgcaaaca
caggccgccgaaattgatgtggatttgctgtggtcggtatgtggcgaagaggaatttagc
ggccaaaccgccgcacaagaatattttggcaataaccccagccaaaccgaacaggccgcc
attttaatcgccttatttgccgcaccgatgtatttctataaaaaagccaaaggcattttt
aaagccgcgccggaagaaaccttacgccaggcactggcagcgattgagcgaaaacagcag
caagaagcgcaaattgctgcatgggtagccgagctggcagaaggcaggctgcctgaagcc
gtggccgccgacttgccatcattgctgcacgcgccagacaagcaaagcctcacttacaaa
gcgtttaccaaagcggcggatcagcaaaaaaaatcgcccttcgcattggcacaggccttg
ggtggcgtgccgtcgttgccacagtattttttggacggctttttgctgaaaaatttcccc
cacggcatcggctggggcgatgtgtcgttgccgcccatgccggccttgccgcaagccgcc
gccatggcgttttcgattgatgatatcgataccaccgaggtagacgatgccttaagccta
caagttttgcccaatggcaaccaccttatcggcatccacattgccgcgcctgcgctggcc
atggcagcgggtgacgacatggaggcacaggtgtttgcccgccaaagtacggtgtattat
cccagcggcaaaatcaccatgctgcctgatgaatgggtagccgcgtttagcctcgatgcc
gggcaacaccgcccggcggtgagcctgtatgcggaagtggacgcggattacaaagtggtg
gccacccaccatcaagtggaagcggtgtggattagtgaaaacctgcgcattcaaaatatt
gaaccgctgtttttgccgcaacaagcgcgcagccaaaccgaggctttcccgcatcaaaca
cagatgaactggctctacgactttgccattgcccagcagcaggcacgcggcaaatacgac
cccacccgcccgccgcaatacgattacggcattgtggtggacgaccaagagcacgtgagc
atcagcgtgcgcgaacgcggcgcgccgattgataccgtggtgagtgagctgatgattttg
gccaacagcacctgggcgcaaatgctgcatgaagccgaagtgggcggcctgttccgcgtg
caaccggcgggtaaggtgcgcatgagcacccagtctgagccgcacatcggcttgggcttg
cagcactatgcctggtttacctcacctttgcgccgtgccgccgactacatcaaccaaaaa
caactgctcagcctgattcagccggatacaccgccgcgctttgcccccaaagacggcatg
ctgtttgccgccctgcgcgattttgaatccacctacaccgcctatgccgattttcagcgc
caaatggaaagctattggagcttggtgtatgtacaacaacagcaattgaatgagttgaat
gccgtggtattgaaagaagatttggtgcgcatcgaaggcctgcccttggtggcgcgtgcc
agcggcatcccagtggatgccctgcccaaaagccgggtgcggctggcggtgagcggtgtt
gatttaaaccaaatcagcatcggtttgaattatttgaacgccatcgcgcccagcccgatt
gatgctgcctga
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