Puntigrus tetrazona (Sumatra barb): 122323226
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Entry
122323226 CDS
T08985
Symbol
fan1
Name
(RefSeq) fanconi-associated nuclease 1 isoform X1
KO
K15363
fanconi-associated nuclease 1 [EC:3.1.21.-
3.1.4.1
]
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
122323226 (fan1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ptet03400
]
122323226 (fan1)
Enzymes [BR:
ptet01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.1 phosphodiesterase I
122323226 (fan1)
DNA repair and recombination proteins [BR:
ptet03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
Other FA pathway factors
122323226 (fan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAN1_TPR
VRR_NUC
Fan1_SAP
FAN1_HTH
zf-TRAF
Motif
Other DBs
NCBI-GeneID:
122323226
NCBI-ProteinID:
XP_043072856
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All DBs
Position
18:3769487..3776491
Genome browser
AA seq
1009 aa
AA seq
DB search
MESQMGKGSSSNRGRVRRLSVTKKKSQKVSAIKEGTSSGSGVASITSFFRNTPPCKLACP
LCGKLVPRYKINEHIDSQCQNFLGEVNDDALAISDDKEGEIPKISSNGASGNDGEEENPG
ENASPYFKKNCVMRLCDEDSSETNLQAKPVKTVGLGSLSSKLSRRALRLSDESEMDHTHV
SGKEEALDAELSSSQKENFMKSSTFKPKAGDVDTNNTFPTEQAASNKPQVKNIEKTIAVL
AESSSSSDVQSLKSSSSSRVLKRKSGELPKNDTHTTETSIARKKSRYFQSKTGNGHETNF
KSDQNEASSDAVSLPDSQIKSKSTKKDIERKPDAAPANEPKAFGIEKVSEGSEHQHTRLP
YYLQNFRTVLEAVLENEDDRMLFNEEDFSTIHTFQQLSVPGQKLCVRLFQRKLKWLQVSK
LEYTEIGSDLRPVIQELVTCGFLQTESELRDIREVLDLLPAPELRNLAKTFHLGRGGNGT
QKQQLVEGLLQLGKQRSLFVSQNNTAAVILKRAKQAAGSCVRLCRGPRAVFSRVLLLFSL
TDTLEEEEMAAGGQGQLYTILLVNSGRLAFPEYTVNRSTRLFEDRDDLIRYETAMRTLQE
VIAAMQTGSWEDAHALYATAKATWQEMKETSDLSRQEQLPVFLRCFTVGWTYTRILSRGV
EISQRLRRYEDAVEELRTLLSQSVYCVDSRGRWWDRLALNLQQHLKKHEQAICAIRDGLN
DPLVRTGHKLSLHQRASRMKESASLKKYRLLLRDLPAVHVQDVTHVTIRGQLFPHEGGMG
KSVFLRAANEDEGSTEGRGTMVMCSVEELAMEHYRTLGFDQGIHGEGSTFSTLFGLLMWD
LVFIDGVPDVFRNPYQTCPLDLHTDCFYGNRREAIKARAEMLHKASAETLQELLADVWKA
QEGRVCALINWERFSSLQQAQSLVACLGGHFLSGVVLRMAKDYRHCRGGLPDLVVWSTSN
KKYKLVEVKGPNDRLSQKQQIWLDELHKLGADVEVCHVTAIGARGAQRE
NT seq
3030 nt
NT seq
+upstream
nt +downstream
nt
atggagtctcagatgggcaaaggcagctcatctaacagaggccgagtcaggagactctcg
gtgacaaagaaaaagagccaaaaggtcagtgcaatcaaagagggaacaagcagtggaagt
ggggttgcttccataacttcatttttcaggaatacaccaccgtgtaaattggcatgccct
ctgtgtggcaaacttgtgcctcgttacaaaattaatgaacatatagactctcagtgtcag
aattttcttggagaggttaatgacgatgcactggctatcagtgacgacaaggagggggaa
atacccaaaatatcctctaatggtgcatctggaaatgatggggaagaggaaaacccagga
gagaatgcaagtccatattttaaaaagaactgtgtgatgaggctgtgtgatgaagattca
tctgaaacaaatttacaggctaagccagttaaaacagtcggtctcggaagtttgtcctct
aaactgtctagaagagcacttagactttcagatgaatcagagatggatcacactcatgtc
tctggaaaagaagaggctcttgatgcagaactgagcagttcacagaaggaaaatttcatg
aagagttcaacttttaaacctaaagctggtgatgtggatacaaataacacattccctaca
gaacaagctgcttcaaacaaacctcaagtgaaaaacatagagaaaactatagcggttctt
gcagaatcgagcagcagctctgacgttcagtcattgaaatcttcttcctcatccagggta
ttaaagaggaaatcgggcgaattgcctaaaaatgacacacacactacagaaacctccatc
gcacgtaagaaaagtagatatttccaaagtaaaaccggaaacggacatgaaacaaatttc
aagtccgatcagaatgaggcctcgtctgatgccgtttcattaccagacagtcaaatcaaa
agcaagagcacaaaaaaggacattgagaggaagcctgatgctgcaccagccaatgagccc
aaagcgtttggcatagagaaagtcagcgagggatcggagcatcagcacaccaggctgccg
tattacctgcagaactttcggactgtccttgaggcggtgttggagaatgaggatgatagg
atgcttttcaatgaggaagacttctcaaccattcacacttttcagcagctctcagtacct
ggtcagaagctttgtgtccgtctatttcaaaggaagctgaaatggcttcaggtcagtaag
ctggagtacacagagatcggctcagacctcagacctgtcattcaagagctggtcacatgt
ggcttcttacaaacggaatctgagcttcgtgatattcgagaagttttggatctgctgcct
gcaccggagcttagaaacctggccaaaacatttcaccttggccgtggagggaatgggact
cagaaacagcagttggtggaggggctactccagctgggaaaacaacgatccctcttcgtc
agtcaaaacaacacggctgctgtcattctcaagagggccaagcaggcagcaggttcctgt
gtgcgtctgtgccgcgggccgcgtgctgtgttctcccgtgtcctgctcctgttctccctc
acagacactttagaggaggaggagatggccgctggaggtcagggccagctatacaccatt
ctgcttgtcaactctggtcggctagctttcccagagtacacagtaaatcgctcgaccaga
ctgtttgaggaccgggatgacctcatcaggtatgaaacagcaatgcgcacgctgcaggaa
gtgattgctgcgatgcagacaggcagctgggaggatgcccatgccctctatgctacagca
aaggccacctggcaggagatgaaagaaaccagtgacctaagtcgtcaggagcaactgccg
gtttttctgcgctgtttcactgtgggctggacctacactcggatactgtctcgaggagtt
gagatttcacaaagacttcggcgctacgaggatgctgtggaggagctcaggactctactg
tcccagtcagtgtattgtgtggacagtagggggcgctggtgggacagacttgctctcaat
ctccaacaacaccttaaaaaacacgagcaggccatttgtgctatccgggatggactgaac
gaccctctggttcgaacaggccacaaattgtcacttcatcagcgagcttcccgaatgaag
gaatctgccagcttgaagaaataccgtctgctgctccgagatctgcccgcagtgcacgta
caggatgtcactcatgtgacgattcgaggccagctctttcctcatgagggtggtatgggc
aaatcagtgttcctcagagcagccaatgaggacgaaggatccacagagggacgggggact
atggtcatgtgttctgttgaggaactggctatggaacactacagaacacttggttttgat
caaggtattcatggggaaggctctacattttccactctttttggactcctcatgtgggac
ctcgtctttatcgacggggttcctgatgtcttccgaaacccctaccagacttgtcctctg
gatttgcacactgattgtttctatggtaaccggcgggaagccatcaaggctcgtgctgag
atgttgcacaaggcgtctgccgagacgctgcaggagctgctcgctgatgtgtggaaggca
caggaggggagagtgtgtgctctgataaactgggagcgtttctcctctcttcagcaggca
cagagtctagtggcttgtttgggaggccacttcctgagtggtgtggtcctcagaatggca
aaggactacaggcattgcagaggagggcttccagatctagtagtctggagcacatccaac
aagaagtacaagctggtggaagtgaagggtcctaatgaccgtctgtcccagaagcaacag
atatggctggatgagctgcataagcttggggccgatgtagaagtttgtcatgtcactgcc
atcggagcgcgaggggctcaacgggagtga
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