Puntigrus tetrazona (Sumatra barb): 122323372
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Entry
122323372 CDS
T08985
Symbol
zgc:91944
Name
(RefSeq) homeobox-containing protein 1 isoform X1
KO
K24885
homeobox-containing protein 1
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ptet03000
]
122323372 (zgc:91944)
Transcription factors [BR:
ptet03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
122323372 (zgc:91944)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HNF-1_N
Homeodomain
Homeobox_KN
HTH_3
AbiJ_NTD3
HlyD_D4
Motif
Other DBs
NCBI-GeneID:
122323372
NCBI-ProteinID:
XP_043073109
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Position
19:complement(9098865..9109003)
Genome browser
AA seq
469 aa
AA seq
DB search
MRQWCLPAVAPRAEPLPTGRLSPQISDVRMECCDVEPRYTIEQIDLLQRLRLSGMTKPQI
IQALESLERLDPDHRTPCCNNHSAPPSAPTSAAPAAPSSSSSSSSSLTSATTQTPVMDAA
LSPSNSYDASPPPMYPPSGVQRSFSYDLAEEDWDLEEKVEEYMRRDSNLVKEEIKAFLNN
RRISQAIVGQVTGISQSYISQWLLQQGLEMSDSKRRAFYRWYLLERNSPGIRWSENQHAQ
VPRSRTDTPWNRQRELLMHLLPWYSAHQSQSGATLSMRSLVKEEPDWRLAGSPADRAAVG
PFRLRRGSRFTWRKECQSIMESFFIENQYPDEGKREEIANACNAVIQKPGCKLSEFERVT
ALKVYNWFANRRKEMKRRANIEAAILESHGIEVPSPSCHSNSEEVETQEFGDQVMSQRFS
EQEELSQRKDIEPEGAMLPPVEVVSPPSPTSQLIERKLKESKREATDDD
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtggtgccttcctgctgtggctccacgcgccgaaccgctcccaacgggccgg
ttatcacctcagatctcagatgtcaggatggagtgttgcgacgtggagccgcgctacacc
atcgaacagatcgacctgctccagcgtttgaggctgtcagggatgaccaaacctcagatc
attcaagccctcgagtctttagagaggctcgatccggaccatcgtaccccgtgctgcaac
aatcactcggccccacccagcgcccctacctccgcagcccctgctgctccctcctcctcc
tcctcttcctcctcctctcttacctcagccaccacgcaaacccctgttatggatgctgca
ttgtcgcctagcaacagctatgatgcctcgccccctcccatgtacccacccagcggagtt
cagaggtcgtttagttacgacttggcagaagaggactgggatctggaggagaaggtggag
gaatacatgaggagggacagcaaccttgttaaagaagaaataaaggcttttctcaataac
agaaggatctcgcaggcaattgtgggacaagtcacaggtatcagtcagagctacatctct
cagtggcttctgcagcagggtctggagatgagcgactccaaacgcagggccttctatcgc
tggtacctgctggagcgcaacagcccaggaatcagatggagtgaaaaccagcatgctcag
gtccccaggagcaggactgacactccctggaatagacagagagaactgctgatgcacctc
ctcccctggtactctgctcaccagtcccagtcaggtgccacactgtctatgcgttcactg
gttaaggaggagcctgactggaggctggctggaagccccgcagacagggcagcagtcggg
ccttttagactgcgcagaggtagtcgcttcacctggagaaaggagtgccagtcaatcatg
gagagtttctttatagagaatcagtatcctgatgagggcaaaagagaggaaattgccaat
gcttgtaatgctgtcattcaaaaacctggatgcaaactttcagaatttgaacgagtcact
gcactcaaagtgtacaactggtttgccaatcggaggaaggagatgaagagacgtgccaac
atagaggctgccatactggaaagccatgggatagaggtgcccagccccagctgccactcc
aacagcgaagaggtcgagactcaggagtttggagatcaagtcatgagtcagaggttctct
gagcaggaggagctctctcaaagaaaagacattgagcccgaaggcgccatgctacctcca
gtggaagtggtgtctcctccaagcccgacctctcagctcatagagcggaaattgaaagaa
tcgaaaagggaggctactgatgatgattaa
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