Puntigrus tetrazona (Sumatra barb): 122323414
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Entry
122323414 CDS
T08985
Name
(RefSeq) elongation factor 1-alpha-like
KO
K03231
elongation factor 1-alpha
Organism
ptet
Puntigrus tetrazona (Sumatra barb)
Pathway
ptet03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
ptet00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
122323414
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ptet03019
]
122323414
03016 Transfer RNA biogenesis [BR:
ptet03016
]
122323414
03012 Translation factors [BR:
ptet03012
]
122323414
04131 Membrane trafficking [BR:
ptet04131
]
122323414
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
ptet04147
]
122323414
Messenger RNA biogenesis [BR:
ptet03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
122323414
Transfer RNA biogenesis [BR:
ptet03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
122323414
Translation factors [BR:
ptet03012
]
Eukaryotic type
Elongation factors
122323414
Membrane trafficking [BR:
ptet04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
122323414
Exosome [BR:
ptet04147
]
Exosomal proteins
Proteins found in most exosomes
122323414
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
122323414
NCBI-ProteinID:
XP_043073163
LinkDB
All DBs
Position
19:13498275..13502198
Genome browser
AA seq
462 aa
AA seq
DB search
MGKEKTHINIVVIGHVDSGKSTTTGHLIYKCGGIDKRTIEKFEKEAAEMGKGSFKYAWVL
DKLKAERERGITIDISLWKFETSKYYVTIIDAPGHRDFIKNMITGTSQADCAVLIVAAGV
GEFEAGISKNGQTREHALLAYTLGVKQLIVGVNKMDSTEPPYSQKRYEEITKEVSAYIKK
IGYNPATVAFVPISGWHGDNMLEPSTNMSWFKGWKIERKEGAASGVTLLEALDSILPPSR
PTDKPLRLPLQDVYKIGGIGTVPVGRVETGTLKAGMVVTFAPANVTTEVKSVEMHHESLA
EALPGDNVGFNVKNVSVKDIRRGNVAGDSKNDPPQEAGNFTAQVIILNHPGQISQGYAPV
LDCHTAHIACKFSELKEKIDRRSGKKLEDNPKALKSGDAAIILMVPGKPMCVESFSQYPP
LGRFAVRDMRQTVAVGVIKAVDKKTSTGGKVTKSAQKAAKTK
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaggaaaagactcatattaacatcgtggttatcggccatgtcgattctggcaag
tccaccaccaccggacatctcatctacaaatgtggaggcatcgataagagaaccatcgag
aagttcgagaaagaagccgctgagatgggcaagggctccttcaagtacgcctgggtgctg
gacaaactgaaggccgagcgtgagcgtggtatcaccattgacatttctctctggaaattc
gagaccagcaagtactacgtcacaatcattgatgcccctggacacagagacttcatcaag
aacatgatcactggtacttctcaggctgactgtgccgtgctgattgtcgctgccggtgtt
ggtgagtttgaggctggtatctccaagaacggacagacccgtgagcatgccctgcttgcc
tacaccctgggggtcaaacagcttatcgttggagtcaacaagatggactccaccgagccc
ccctacagccagaagcgttatgaggagatcaccaaggaagtcagcgcctacatcaagaag
atcggctacaaccccgccactgttgccttcgtccccatttctggatggcacggcgacaac
atgctggagcccagcacaaacatgagctggttcaagggatggaagattgagaggaaggaa
ggtgctgccagcggtgttactcttcttgaggccctggactccatcctgccacccagtcgc
cccaccgacaagcccctccgcctgcctttgcaagatgtgtataagattggaggtattgga
actgtgcctgttggacgtgttgagaccggaactctgaaggctggtatggttgtgaccttt
gctcctgccaacgtgaccactgaggtcaagtctgttgagatgcaccacgagtctcttgca
gaggctctccctggtgacaacgttggcttcaacgttaagaacgtgtccgtcaaggacatc
cgccgtggtaacgtggctggagacagcaagaacgacccccctcaggaggctggcaacttc
acagctcaggtcatcatcctgaaccaccctggccagatctctcagggctatgccccagtg
ctggactgtcacactgctcacattgcctgcaagttttctgagctcaaggagaagatcgac
cgtcgttctggcaagaagcttgaggacaaccccaaggctctcaaatctggagatgctgca
attattcttatggtccctggcaaacctatgtgtgtggagagcttctctcagtacccacca
ctgggtcgctttgctgtgcgtgacatgaggcagaccgtcgctgttggtgtcatcaaggcc
gttgacaagaaaacctccactggtggcaaggtgaccaagtctgctcaaaaggctgccaaa
accaaatga
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